Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00034 ATGTACCAAGGCCCTCGAGTTTCAAGCCTTTACTGGCCCGATCCTTGGCTTCAGAGCAATGATTTCGGAAGTGGTAATGGTAGATTATCTTACAACGATACCAGGGTTGCTGTACTTGATCATTTAGGCTACATGGTTTCTTCCGATAATTTCACTTTCAGAACAAGTGATTACGGGACTGTGCTCCAACGGAGATTGACCCTCGATCACGATGGTAATGTTCGTGTGTATAGCAAGAAAGACGTAGAAGAAAAATGGTCAATGTCAGGGCAATTCAATTCTCAACCATGTTTTATTCATGGGATTTGTGGACCCAATAGTATTTGTAGCTATGATCCTAAAAGTGGTAGAAAGTGTTATTGTATTAAAGGGTATAGCTGGGTTGATAGCCAAGACTGGTCTCAAGGTTGCATTCTAAATTTCCAACTAAGATACAACAACAACACTGAGAAGGAGTCTCGCTTCCTGCACTTACCCGGAGTCGATTTTTATGGATACGACTACGGCATCTTTGGGAATCGAACTTATGAAGAATGTGAGAATCTGTGCTTGGGATTGTCCCAATGCAAAGGGTTTCAGCACAGATTTTGGCAGCCAGATGGTGTGTTTATCTGTTTCCCGAAGACGCAGTTGCTAAATGGGTATCATACACCAGGTTTCACAGGATCAATTTTCTTAAGACTGCCAAGAAATAGTCCTCTGTCGCTCAGTGACAGTGAGAACCCCATCAATTATAACAACGGCTTTGTTTGTGGGGGAAGTAATGGAGGACTGAAACTACTGGATAGACCATATGTGGAAGAAGAGGAAAATGAATCAGTGAAGCTCTTGCTTTGTTTTGTGACTGCCTTGGGAGGAATTGAGGTTGCGTGCATCTTTCTGGTGTGGTGTTTCTTGTTTAGGAACAAAAATAGGAAATTACACTCGGGTGTTGACAAACCCGGCTATGTTCTTGCAGCTGCAACGGTATTTAGGAAATTCAGTTACTCTGAACTGAAAAAGGCAACCAAAGGTTTCAGTGAAGCCATTGGAAGGGGTGGTGGAGGTACTGTGTATAAGGGTGTCTTGTCTGATAGTCGAGTTGTGGCAATAAAGAGACTGCATCAAGTAGCAAACCAAGGAGAAAGTGAGTTCCTGGCTGAAGTAAGCATCATTGGAAGGCTTAACCACATGAACCTAATCGACATGTTGGGGTATTGTGCAGAGGGAAAGTATAGATTGTTGGTTTATGAGTACATGGAAAATGGTTCTTTAGCTCAAAACCTCTCATCAAGTTCAAATGCACTTGATTGGAGTAAAACATATAACATTGCTGTTGGAACAGCAAAGGGTCTGGCCTACTTGCATGAAGAATGCTTGGAGTGGATTCTGCATTGTGATATTAAGCCACAAAATATACTTCTCGACTCTGATTATAAACCCAAGGTAGCAGATTTTGGCTTGTCTAAGCTACTTAACCGGAACAGCAACCTCGACAATTCAAGTTTCTCGAGGATAAGAGGAACAAGAGGCTACATGGCACCAGAATGGGTTTTCAACTTGCCAATCACTTCCAAGGTGGATGTTTACAGCTATGGAATTGTTGTCTTGGAGATGATAACTGGAAGGAGCGCAACAGCAGGTACCCAAATCACAGAATTAGAAGCAGAGTCGTATCATCACGAGAGGTTGGTAACATGGGTGAGGGAGAAAAGGAAGAAAGGATCAGAAGTGGGATCATGCTGGGTGGATCAAATCGTTGACCCTGCTTTGGGGTCAAACTATGAGAGAAATGAAATGGAGATATTGGCAACGGTGGCTTTGGAATGCGTAGAGGAAGACAAAAACGCGAGACCAAGCATGAGTCAAGTTGCCGAGAAGCTGCAAAGATATGCACACACTTCTTGA 1887 0.4293 MYQGPRVSSLYWPDPWLQSNDFGSGNGRLSYNDTRVAVLDHLGYMVSSDNFTFRTSDYGTVLQRRLTLDHDGNVRVYSKKDVEEKWSMSGQFNSQPCFIHGICGPNSICSYDPKSGRKCYCIKGYSWVDSQDWSQGCILNFQLRYNNNTEKESRFLHLPGVDFYGYDYGIFGNRTYEECENLCLGLSQCKGFQHRFWQPDGVFICFPKTQLLNGYHTPGFTGSIFLRLPRNSPLSLSDSENPINYNNGFVCGGSNGGLKLLDRPYVEEEENESVKLLLCFVTALGGIEVACIFLVWCFLFRNKNRKLHSGVDKPGYVLAAATVFRKFSYSELKKATKGFSEAIGRGGGGTVYKGVLSDSRVVAIKRLHQVANQGESEFLAEVSIIGRLNHMNLIDMLGYCAEGKYRLLVYEYMENGSLAQNLSSSSNALDWSKTYNIAVGTAKGLAYLHEECLEWILHCDIKPQNILLDSDYKPKVADFGLSKLLNRNSNLDNSSFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGRSATAGTQITELEAESYHHERLVTWVREKRKKGSEVGSCWVDQIVDPALGSNYERNEMEILATVALECVEEDKNARPSMSQVAEKLQRYAHTS 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00034 628 SMART serkin_6 337 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00034 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Gma03g00034 628 Gene3D Phosphorylase Kinase; domain 1 305 412 - -
Gma03g00034 628 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 627 - -
Gma03g00034 628 SUPERFAMILY Protein kinase-like (PK-like) 318 621 IPR011009 -
Gma03g00034 628 Pfam Protein kinase domain 341 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00034 628 Pfam S-locus glycoprotein domain 50 126 IPR000858 GO:0048544
Gma03g00034 628 ProSiteProfiles Protein kinase domain profile. 337 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00034 628 Gene3D Transferase(Phosphotransferase) domain 1 413 628 - -
Gma03g00034 628 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 1 627 - -
Gma03g00034 628 CDD STKc_IRAK 343 623 - -
Gma03g00034 628 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00034 Gma-Chr3 379359 381245 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00034 327 621 Trihelix Transcription Factor Family AT5G38560 43.289 7.68e-69 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gma03g00034 Pkinase 7.7e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00034 - - gmx:100810552 1229.93