Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00032 ATGGCCTCGTCAACACTCCTTCTGGCTCTTGTAATTCTCCACAATTTTCAGCACTCAACACAATATTCGTTCTCCCTCTCCGTGGAGAACCTCAAAGAAGACGTTATAGTATCATCTCCCAAAGCTACATTCACCGCAGGGTTTTACCCTGTTGGAGAAAACGCATACTGCTTCGCAATATGGTACACCCAACAACCTCACACCCTTGTTTGGATGGCCAACCGGGACCAACCGGTAAACGGAAAGCTCTCCACCCTTTCCCTTCTCAAAACCGGCAACCTTGCATTAACCGACGCTGGCCAGTCAATAGTGTGGTCCACCAACACCATCACCTCATCGAAACAAGTCCAGTTACATTTGTATGACACCGGCAACCTCGTCCTCCTCGACAACCAACAAAACCGTTCCTCCAACATTGTTGTTCTGTGGCAAAGCTTCGATTTCCCAACGAACACGCTTCTTCCTGCTCAAATTCTCACCAAGAACACCAACCTTGTTTCCTCGAGAAGCGAGACCAACTATTCCTCCGGTTTCTACAAGCTCTTCTTTGACTTCGAGAACGTTCTTCGTCTCATGTACCAAGGTCCTCGAGTTTCAAGCGTTTACTGGCCAGATCCTTGGCTTCAGAACAATAATTTCGGTAATGGTGGCACGGGTAATGGTAGATCCACTTACAACGATAGCAGGGTTGCTGTACTTGATGATTTCGGCTACTTTGTTTCTTCCGATAACTTCACTTTCAGAACAAGTGATTACGGGACGCTGCTCCAACGGAGATTGACCCTCGATCACGACGGTAGTGTGAGGGTGTTTAGCTTCAACGATGGACACGACAAGTGGACAATGTCAGGGGAATTTCACTTACATCCCTGTTACGTTCATGGGATTTGTGGACCTAATAGTTATTGCAGTTACGAGCCATCAAGTGGTAGAAAGTGTTCGTGTCTTCCAGGTCATACTTGGGTTGATAGTCAAGATTGGTCTCAAGGTTGCACACCAAATTTCCAACATTTATGCAACAGCAACACCAAGTACGAATCTCGCTTCCTGCGAATACCTGACATTGATTTCTATGGATACGACTATGGCTACTTTGGAAATTACACTTATCAGCAATGTGAGAATCTGTGTTCGCAATTGTGCGAATGCAAGGGGTTTCAGCACAGCTTTTCGGAGGCAAATGCTTTCTTTCAATGCTACCCAAAGACACATTTGCTAAATGGGAATAGTCAACCAGGTTTCATGGGATCATTCTTCCTGCGACTGCCTTTGTCGTCCCATGATGAGTATGAGAACCCCGTCCAAAATAATAGAAGTGGCTTGGTTTGTGGGGGAGATGTTGGAAACGTAAAGATGCTGGAGAGATCGTACGTTCAAGGGGAAGAAAATGGATCCTTGAAGTTCATGTTATGGTTTGCAGGTGCCTTGGGAGGAATTGAGGTTATGTGCATCTTTCTGGTGTGGTGTTTACTGTTTAGGAATAATAGGACTTTACCCTCAAGTGCTGACAGACAAGGGTATGTTCTTGCAGCAGCAGCAGGGTTTCAGAAATTCAGTTACTCTGAACTGAAACAAGCCACCAAAGGCTTCAGTGAAGAGATTGGAAGGGGTGCTGGAGGTATTGTGTACAAGGGTGTGTTATCTGATGATCAAGTTGTGGCCATAAAGCGATTGCATGAAGTAGCAAACCAAGGAGAGAGTGAGTTCTTGGCTGAAGTAAGCATCATTGGAAGGCTTAACCACATGAACTTAATTGGCATGTTGGGGTATTGTGCAGAGGGAAAGCATAGATTGTTGGTTTATGAGTACATGGAGAATGGTTCTTTAGCTCAGAACCTTTCATCAAATTCAAATGTACTTGAATGGAGTAAAAGGTATAACATTGCTCTGGGAACAGCAAGGGGTCTGGCCTACTTACATGAAGAATGCTTGGAGTGGATTTTGCATTGTGATATTAAGCCACAAAATATACTTCTTGACTCTGAATACCAACCCAAGGTAGCAGATTTTGGCTTGTCTAAGCTTCTTAACCGGAACAACGTCAACAATTCAAGCTTCTCAAGGATAAGAGGAACAAGAGGCTACATGGCACCGGAATGGGTTTACAACTTGTCAATCACTTCCAAGGTGGATGTTTATAGCTATGGAATTGTTGTCTTGGAGATGATAACTGGAAGGAGCCCAACAACAGGTGTTCGAATCACCGAATTAGAAGCAGAGTCAGATCATCGCGAGAGGTTAGTGACATGGGTGAGGGAGAAAAAGATGAAAGGATCAGAAGCGGGATCTTCTTGGGTGGATCAAATCATTGACCCTGCTTTGGGATCCAACTATGCCAAGAATGAAATGGAAATATTGGCAAGGGTGGCTTTGGAATGTGTAGAGGAAGAGAAAAACGTCAGACCCAACATGAGTCAAGTTGTCGAGAAGCTGCAAAATCATAGTATGCACACAATTGTTGATGGTTTGAACAAAGAATAG 2481 0.445 MASSTLLLALVILHNFQHSTQYSFSLSVENLKEDVIVSSPKATFTAGFYPVGENAYCFAIWYTQQPHTLVWMANRDQPVNGKLSTLSLLKTGNLALTDAGQSIVWSTNTITSSKQVQLHLYDTGNLVLLDNQQNRSSNIVVLWQSFDFPTNTLLPAQILTKNTNLVSSRSETNYSSGFYKLFFDFENVLRLMYQGPRVSSVYWPDPWLQNNNFGNGGTGNGRSTYNDSRVAVLDDFGYFVSSDNFTFRTSDYGTLLQRRLTLDHDGSVRVFSFNDGHDKWTMSGEFHLHPCYVHGICGPNSYCSYEPSSGRKCSCLPGHTWVDSQDWSQGCTPNFQHLCNSNTKYESRFLRIPDIDFYGYDYGYFGNYTYQQCENLCSQLCECKGFQHSFSEANAFFQCYPKTHLLNGNSQPGFMGSFFLRLPLSSHDEYENPVQNNRSGLVCGGDVGNVKMLERSYVQGEENGSLKFMLWFAGALGGIEVMCIFLVWCLLFRNNRTLPSSADRQGYVLAAAAGFQKFSYSELKQATKGFSEEIGRGAGGIVYKGVLSDDQVVAIKRLHEVANQGESEFLAEVSIIGRLNHMNLIGMLGYCAEGKHRLLVYEYMENGSLAQNLSSNSNVLEWSKRYNIALGTARGLAYLHEECLEWILHCDIKPQNILLDSEYQPKVADFGLSKLLNRNNVNNSSFSRIRGTRGYMAPEWVYNLSITSKVDVYSYGIVVLEMITGRSPTTGVRITELEAESDHRERLVTWVREKKMKGSEAGSSWVDQIIDPALGSNYAKNEMEILARVALECVEEEKNVRPNMSQVVEKLQNHSMHTIVDGLNKE 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00032 826 Pfam S-locus glycoprotein domain 244 319 IPR000858 GO:0048544
Gma03g00032 826 ProSiteProfiles Bulb-type lectin domain profile. 22 141 IPR001480 -
Gma03g00032 826 Gene3D Transferase(Phosphotransferase) domain 1 604 822 - -
Gma03g00032 826 CDD B_lectin 38 149 IPR001480 -
Gma03g00032 826 SMART serkin_6 528 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00032 826 SUPERFAMILY Protein kinase-like (PK-like) 513 811 IPR011009 -
Gma03g00032 826 CDD STKc_IRAK 534 813 - -
Gma03g00032 826 PIRSF SRK 1 821 IPR024171 GO:0004674
Gma03g00032 826 Gene3D Phosphorylase Kinase; domain 1 496 603 - -
Gma03g00032 826 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 204 IPR036426 -
Gma03g00032 826 Gene3D - 26 148 IPR036426 -
Gma03g00032 826 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 3 817 - -
Gma03g00032 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Gma03g00032 826 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 3 817 - -
Gma03g00032 826 ProSitePatterns Protein kinases ATP-binding region signature. 534 556 IPR017441 GO:0005524
Gma03g00032 826 SMART blect_4 27 149 IPR001480 -
Gma03g00032 826 ProSiteProfiles Protein kinase domain profile. 528 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00032 826 Pfam Protein kinase domain 531 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00032 826 Pfam D-mannose binding lectin 68 164 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00032 Gma-Chr3 371851 374869 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00032 518 811 Trihelix Transcription Factor Family AT5G38560 44.444 3.40e-73 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gma03g00032 Pkinase 7.5e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00032 - - gmx:100808940 1647.87