Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00031 ATGGCCACTTCACCATTATCACAACTACTACTATCTCTGATTCTCCTCCAGAATTTTCACCATTCACATTCCTTCTCCCTCTCCGTTGAGAACCACAATGAAGACGTCATAGTTTCATCACCCAATGCCACATTCACCGCAGGTTTTTACCCCGTCGGTGAAAACGCTTTCTGCTTCGCAATATGGTACACCCGGCCACCTCGTACCGTCGTTTGGATGGCCAACCGGGACCAGCCGGTAAACGGAAAACGCTCCACGCTCTCCCTTCTCGGAACCGGTAACCTCGAACTAACCGATGCCGGTCAGTTCATCGTGTGGTCCACAAACACCGCCACCCCATCGAAACAAAACCCCCGGTTACATTTGTACGACACCGGCAACCTCGTACTAATAGCAATCCTCGACAACTCCGAAGATCATGTTTTGTGGCAAAGCTTCGATTTTCCGACGGACACGCTTCTTCCTAACCAACCTCTGAGCAAGAGCACCAACCTCGTTTCATCGAGAAGTGGGACCAACTATTCCTCCGGTCACTACAAGCTCTTCTTCGACTTCGAGAATGTTCTGCGTCTCATGTACCAGGGTCCTCGAGTTTCGAGTGTTTACTGGCCTTACGCTTGGCTTCAGAGCAATAACTTCGGTAATGGGAATGGTAGATCCACTTTCAATGATAGCAGGGTTGTTGTGCTGGACGATTTCGGCAAACTGGTTTCTTCTGATAACTTCACTTTCACTACAATTGATAGCGGAACGGTGGTGCTTCGACGAAGATTGACCCTCGATCACGACGGAAATGCGAGGGTGTATAGCATCAGAGACGGAGAAGATAATTGGAAGGTGACGGGAATATTCCGGCCACAGCCTTGTTTTATTCACGGGATTTGTGGACCCAATAGTTATTGCAGTAATAAACCAACTACTGGAAGAACGTGTTCCTGCCTTCCAGGATATAGATGGGTTGATAGTCAAGACTGGTCTCAAGGTTGTGAATCAAGTTTCCAGCTTTGGTGCAACAACACTGAGAAAGAGTCTCACTTCCTACGCTTACCTGAATTTGATTTTTACGGATACGACTATGGCTATTATCCAAACCACACGTACGAACAATGTGTGAATCTGTGCTTGGAGTTGTGCGAATGCAAAGGGTTTCAACACAGCTTCTCAGAGAAAAGTGACTCTACTAGTCAGTGCTACCTGAAGACACAGTTGCTAAATGGCCATCATTCACCTGGTTTTAAGGGATCATTCAGCCTGCGACTTCCTTTGTCTCATGACTATGATGAGAAGGCCATCCTAAATAATGACAATGGCTTGGTTTGTGAGGGAAATAGTGGAGGAGCGAAAGAACTAGAGAGACCGTATGTGGAAGAAAAAGAAAATGGATCGGTGAAGTTCATGCTGTGGTTTGCAACTGCCTTGGGAGGAATTGAGATCGTGTGCTTCTTTTTGGTGTGGTGTTTCTTGTTTAGGAATAATGCTGACAAACAAGCCTATGTTCTTGCAGCTGAAACAGGGTTTAGGAAATTCAGTTATTCTGAACTGAAACAAGCCACCAAAGGTTTCTCTCAAGAGATTGGAAGGGGTGCTGGAGGTATTGTGTATAAGGGTGTCTTGTCTGACGATCAAGTTGTGGCGATAAAGCGACTACATGAAGTTGTGAACCAAGGAGAAAGTGAGTTCCTGGCTGAAGTAAGCATAATTGGAAGGCTTAATCACATGAACTTAATTGGCATGTTGGGGTATTGTGCAGAGGGAAAGTATAGATTGTTGGTTTATGAGTACATGGAGAATGGTTCTTTAGCTCAGAACCTTTCATCGAGTTCAAATGTACTTGACTGGAATAAGAGGTATAACATTGCTCTGGGAACAGCAAGGGGTCTGGCTTACTTGCATGAAGAATGCTTGGAATGGGTTTTGCATTGTGATATTAAGCCACAAAATATACTTCTGGACTCTGATTACCAACCCAAGGTAGCAGATTTTGGCTTGTCTAAGCTACTTAACCGGAACAACCTCGACAATTCAACCTTCTCAAGGATAAGAGGAACAAGAGGTTACATGGCACCGGAATGGGTTTTCAACTTGCCAATCACTTCCAAGGTGGATGTTTACAGCTATGGAATTGTTGTGTTGGAGATGATAACAGGAAGGAGCCCAACAACAGGTGTCCAAATCACAGAATTAGAAGCAAAGTCGCCTCATCATGGGAGGTTGGTGACATGGGTGAGGGAGAAAAGGAAGAAAGGATCAGAAATGGGATCATCTTGGGTGGATCAAATCGTTGACCCTGCTTTGGGATCAGActatgacatgaataagatggagatgttggcaacgatggctttggaatgtgtagaggaagagaaagacgtgagacctagcatgagtcatgttgctgagaggctccaaagtcatgaacatgattcttga 2430 0.43 MATSPLSQLLLSLILLQNFHHSHSFSLSVENHNEDVIVSSPNATFTAGFYPVGENAFCFAIWYTRPPRTVVWMANRDQPVNGKRSTLSLLGTGNLELTDAGQFIVWSTNTATPSKQNPRLHLYDTGNLVLIAILDNSEDHVLWQSFDFPTDTLLPNQPLSKSTNLVSSRSGTNYSSGHYKLFFDFENVLRLMYQGPRVSSVYWPYAWLQSNNFGNGNGRSTFNDSRVVVLDDFGKLVSSDNFTFTTIDSGTVVLRRRLTLDHDGNARVYSIRDGEDNWKVTGIFRPQPCFIHGICGPNSYCSNKPTTGRTCSCLPGYRWVDSQDWSQGCESSFQLWCNNTEKESHFLRLPEFDFYGYDYGYYPNHTYEQCVNLCLELCECKGFQHSFSEKSDSTSQCYLKTQLLNGHHSPGFKGSFSLRLPLSHDYDEKAILNNDNGLVCEGNSGGAKELERPYVEEKENGSVKFMLWFATALGGIEIVCFFLVWCFLFRNNADKQAYVLAAETGFRKFSYSELKQATKGFSQEIGRGAGGIVYKGVLSDDQVVAIKRLHEVVNQGESEFLAEVSIIGRLNHMNLIGMLGYCAEGKYRLLVYEYMENGSLAQNLSSSSNVLDWNKRYNIALGTARGLAYLHEECLEWVLHCDIKPQNILLDSDYQPKVADFGLSKLLNRNNLDNSTFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGRSPTTGVQITELEAKSPHHGRLVTWVREKRKKGSEMGSSWVDQIVDPALGSDYDMNKMEMLATMALECVEEEKDVRPSMSHVAERLQSHEHDS 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00031 809 SMART blect_4 28 149 IPR001480 -
Gma03g00031 809 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 5 809 - -
Gma03g00031 809 ProSitePatterns Protein kinases ATP-binding region signature. 525 547 IPR017441 GO:0005524
Gma03g00031 809 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Gma03g00031 809 CDD B_lectin 39 149 IPR001480 -
Gma03g00031 809 ProSiteProfiles PAN/Apple domain profile. 337 431 IPR003609 -
Gma03g00031 809 Gene3D Phosphorylase Kinase; domain 1 486 594 - -
Gma03g00031 809 Pfam Protein kinase domain 522 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00031 809 Gene3D Transferase(Phosphotransferase) domain 1 595 809 - -
Gma03g00031 809 Pfam D-mannose binding lectin 69 163 IPR001480 -
Gma03g00031 809 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 204 IPR036426 -
Gma03g00031 809 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 5 809 - -
Gma03g00031 809 SMART serkin_6 519 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00031 809 Gene3D - 28 147 IPR036426 -
Gma03g00031 809 Pfam S-locus glycoprotein domain 241 318 IPR000858 GO:0048544
Gma03g00031 809 CDD STKc_IRAK 525 803 - -
Gma03g00031 809 ProSiteProfiles Protein kinase domain profile. 519 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00031 809 SUPERFAMILY Protein kinase-like (PK-like) 501 802 IPR011009 -
Gma03g00031 809 PIRSF SRK 1 809 IPR024171 GO:0004674
Gma03g00031 809 ProSiteProfiles Bulb-type lectin domain profile. 22 143 IPR001480 -
Gma03g00031 809 Gene3D Hepatocyte Growth Factor 348 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00031 Gma-Chr3 359977 363382 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00031 509 806 Trihelix Transcription Factor Family AT5G38560 42.525 3.44e-68 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gma03g00031 Pkinase 6.6e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00031 - - gmx:100808408 1655.96