Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00025 ATGGATGATAGAAAGGTATTGGAGGAGCTTGTGAGAGGGCTTGAGTTTGCTAATCAACTTCGACAAGTGATGATTAATGGAAAAGATAATGAGTCATCAGCAACAACGACAACCCCATTTGTTCAAAGTCTTGTCAAGAACGTGTTCAGATCCTTCACCAACACCCTTTTCCTCTTGGACAAGTATCCCTCTTACGAGGTTTCTCACACTACTAAATCTGAGGACTCTCAAGAAAGTTGCAAGGGTTTCACCACTAGGAACAAAAGAGGCTACTACAAGAGAAAAAGAAATACGCAAGAATGGGAGGAGGTGTCGAAAACTCCAAAAGTAGATGGCCACCAATGGAGAAAGTATGGCCAAAAAGAGATCCTGAAAGCCAAATACTCAAGGAGCTACTACAGGTGCACTCACAAGTATGATCAGAATTGTCAAGCAACAAAACAAGTGCAAAGAATTCAAGAGGATCCTCCATTGTATAAGACCACCTATTTGAGCCACCACACATGCAATGACTTGCTAAACTATGAAATCATACCTGATTCCAATAATAATTCTCCTTCGGACACTTCCATATTGCTTAGCTTTAACAACACCTTCCCTACTCCAACCAAACAAGAGTGCCCCTTTTTATCATCTTTTCCCTCACCAATATCAGTGAAGAAATTAGAGGAGGTGATTCCGGCCTCATCTTCGAGGCATAATAATAATGTCACTCTACCACCGCCTGATCCCTGGGATGTTATGTCTAATTCTGCCATGTGTGATTCTGTTGGCCTTGATGATGTCAATCTTTTTTTGGATTTTGATGACTAA 813 0.4108 MDDRKVLEELVRGLEFANQLRQVMINGKDNESSATTTTPFVQSLVKNVFRSFTNTLFLLDKYPSYEVSHTTKSEDSQESCKGFTTRNKRGYYKRKRNTQEWEEVSKTPKVDGHQWRKYGQKEILKAKYSRSYYRCTHKYDQNCQATKQVQRIQEDPPLYKTTYLSHHTCNDLLNYEIIPDSNNNSPSDTSILLSFNNTFPTPTKQECPFLSSFPSPISVKKLEEVIPASSSRHNNNVTLPPPDPWDVMSNSAMCDSVGLDDVNLFLDFDD 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00025 270 Pfam WRKY DNA -binding domain 111 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma03g00025 270 SUPERFAMILY WRKY DNA-binding domain 107 170 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma03g00025 270 ProSiteProfiles WRKY domain profile. 111 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma03g00025 270 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 262 - -
Gma03g00025 270 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 262 IPR044810 GO:0003700
Gma03g00025 270 Gene3D WRKY domain 94 165 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma03g00025 270 SMART WRKY_cls 109 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00025 Gma-Chr3 315352 316907 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00025 5 170 WRKY Transcription Factor Family AT3G56400 36.813 2.85e-32 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma03g00025 WRKY 2.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00025 - - gmx:100811812 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g02502 09 50337330 50339385 Gma03g00025 03 315352 316907 PCT
Gma03g00025 03 315352 316907 Gma09g02502 09 50337330 50339385 PCT