Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02900 ATGGGTTGTTGCCAATCATCGATGTTGCTGAGAGTGGGAGAGAGGGAGACTCACCCTGAAAAGGAGAAGGAAAGGGAAAAGGAAAAAGAGCAAGCGTACGGAAACCACCAGAGGCAGTCTGAGGGAGGAGAGGGCGACGGCGAGAAAGAGGTGGTTGATTTCTCGTTCTCGGAGTTCTCGCTGGCGGAGCTGAAGGCGGCCACCAACAATTTCAGCTCTGAGTATATCGTGTCAGAGAGTGGGGAGAAGGCACCCAATCTGGTGTACAAGGGTCGCCTCCAGAACCAGAGCCGTTGGATTGCTGTGAAGAAGTTCAGCAAGTCTGCTTGGCCTGATCCCAAGCAATTCGTCGAAGAGGCTTCCGGCGTTGGTAAGTTGCGCCATCCAAGGCTCGCTAATTTGATCGGTTACTGCTGCGACGGCGATGAGAGGCTTCTCGTTGCCGAGTACATGCCTAATGACACTCTTGCCAAGCATCTCTTCCACTGGGAAACTCAGACTATTGAGTGGGCCATGCGGTTGCGAGTGGCTCTGTACATCGCACAGGCTTTGCACTATTGCAGTTCTGAGGGGCGTCCCTTGTACCATGACTTGAATGCTTACCGTGTTCTCTTCGACCAGGAAGGTGATCCTCGTCTCTCTTGCTTTGGTTTTATGAAGAACAGCAGGGATGGCAAGAGTTATAGCACCAATCTTGCTTACACACCTCCTGAATATTTAAGAAACGGAAGGGTCACGCCTGAAAGTGTCATTTACAGCTTTGGAACCGTTCTTCTAGACCTCCTCAGTGGCAAGCACATCCCTCCCAGTCATGCACTTGATATGATACAGGGGAAAAACAATATGCTCTTAATGGATTCACATTTAGAGGGAAAGTTTTCAACAGAAGAGGCAACAGTAGTGGTTAATCTTGCCTCTAAATGTTTGCAATATGAACCTAGGGAGCGGCCTGATACAAAGGATTTGGTCACAACACTTGCCCCATTGCATACAAAACCCGATGTTCGTTCTCACATTATGCTTGGAATTCCAAAGCACGAGGAGGTTCCATCAACCCCACAACGTCCTCTTTCAGCAATGGGTGAGGCTTGTTCAAGAATGGACCTAACTGCAATACATCAGATCTTGGTTGCGACACACTACAGAGACGATGAAGGAACTAATGAGTTGTCGTTCCAAGAGTGGACTCAACAGATGAGAGATATGCTGGAGGCAAGGAAGCGTGGAGACTATGCATTCCGTGACAAGGACTTTAAGACAGCCATTGATAACTATTCCCAGTTTATTGATGTTGGAACGATGATCTCTCCAACTGTTTTTGCAAGGCGCAGTCTGTGCTATCTGTTATGTGATCAACCAGATCCTGCACTACGAGATGCAATGCAAGCACAGTGTGTTTATCCAGACTGGCCCACGGCTTTCTACATGCAATCAGTTGCTCTTGCAAAACTGGACATGCACAAGGATGCGGCTGATATGTTAAATGAGGCAGCTGCATTGGAAGAGAAGAGGCAAAGAGGAGCAAGATGA 1530 0.4843 MGCCQSSMLLRVGERETHPEKEKEREKEKEQAYGNHQRQSEGGEGDGEKEVVDFSFSEFSLAELKAATNNFSSEYIVSESGEKAPNLVYKGRLQNQSRWIAVKKFSKSAWPDPKQFVEEASGVGKLRHPRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWETQTIEWAMRLRVALYIAQALHYCSSEGRPLYHDLNAYRVLFDQEGDPRLSCFGFMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIYSFGTVLLDLLSGKHIPPSHALDMIQGKNNMLLMDSHLEGKFSTEEATVVVNLASKCLQYEPRERPDTKDLVTTLAPLHTKPDVRSHIMLGIPKHEEVPSTPQRPLSAMGEACSRMDLTAIHQILVATHYRDDEGTNELSFQEWTQQMRDMLEARKRGDYAFRDKDFKTAIDNYSQFIDVGTMISPTVFARRSLCYLLCDQPDPALRDAMQAQCVYPDWPTAFYMQSVALAKLDMHKDAADMLNEAAALEEKRQRGAR 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02900 509 Coils Coil 490 509 - -
Gma02g02900 509 MobiDBLite consensus disorder prediction 1 48 - -
Gma02g02900 509 ProSiteProfiles Protein kinase domain profile. 74 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02900 509 Gene3D Tetratricopeptide repeat domain 400 508 IPR011990 GO:0005515
Gma02g02900 509 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK11 1 508 - -
Gma02g02900 509 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 508 IPR045845 GO:0004672|GO:0009742
Gma02g02900 509 SUPERFAMILY TPR-like 403 504 IPR011990 GO:0005515
Gma02g02900 509 SUPERFAMILY Protein kinase-like (PK-like) 52 330 IPR011009 -
Gma02g02900 509 Gene3D Phosphorylase Kinase; domain 1 46 150 - -
Gma02g02900 509 Gene3D Transferase(Phosphotransferase) domain 1 152 343 - -
Gma02g02900 509 MobiDBLite consensus disorder prediction 13 48 - -
Gma02g02900 509 Pfam Protein kinase domain 87 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02900 Gma-Chr2 54333953 54343373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02900 16 350 Glycoside Hydrolase AT3G07070 32.961 4.40e-49 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Gma02g02900 Pkinase 5.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02900 K14500 - gmx:100808907 1014.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00026 14 271082 278745 Gma02g02900 02 54333953 54343373 GST