Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02890 ATGGCGACCATTATTCTAGAAAATGACCCTCTTAACTGGAGCCATGCAGCAGATTCACTCAAGGGTAGCCACTTTGAAGAAGTAAAACGCATGGTGGCAGAATACCGGAAGCCACTTATCTCTCTGGGTGGCGGGGAGACACTAACTATATCACAGGTGGCTGCTGTTGCTGTTGCCAATGCCAACCATAACTTGCAGGCTAAGGTTGATCTCTCAGAGTCTGCAAGGGCAGGCGTTGACGCCAGCTGCGACTGGATCACCCAAAACATTAACAAAGGCACTCCCATTTATGGTGTTACCACCGGCTTTGGTGCTGCCTCCCACAGGCAAACTCAACAAGGCCTTGCTCTTCAGAAGGAAATGGTTAGGTTTTTAAACTGCGCAATATTTGGCTACCAGACAGAGTTATCTCACACACTGCCTAAATCAGCAACAAGAGCAGCAATGCTTGTGAGGGTTAATACCCTTCTTCAAGGCTACTCAGGAATCAGATTTGAAATCCTAGAAGCTATCACGAAACTACTGAACCACAATGTCACCCCCATCTTGCCATTACGTGGTACAGTTACTGCGTCTGGTGATCTAATTCCTCTGTCCTACATTGTTGCATTGCTAACTGGTAGGCGAAATAGTAAAGCTGTTGGACCCTCTGGAGAGTCACTTAATGCTAAGGAAGCTTTCCATTTAGCAGGTCTACATTCTGGGTTCTTTGAGTTGAAGCCCAAGGAAGGTGTTGCCCTCGTAAATGGCACGGCCGTTGGGTCTGGCGTAGCTTCTACTGTGCTTTTTGAGGCAAACATATTAGCTTTATTGTCCGAAGTTCTATCAGCAGTTTTTGCAGAAGTCATGCAAGGGAAGCCAGAATTTACACATCATCTAATACATAAGCTGAAGTATCATCCTGGTCAAATTGAAGCTGCAGCTATTATGGAACACATTCTAGATGGAAGCTCTTATGTCAAAGATGCTAAACTGCAACAGCCAGATCCATTGCAGAAGCCAAGAAAAGATCGTTATGCTCTTGTAACTTCTCCTCAGTGGCTTGGTCCACAGATTGAAATCATCCGGTATTCGACCAAATCAATTGAAAGGGAAATAAACTCAGTAAATGACAATCCCTTGATTGATGTCACAAGGAATAAGGCACTGAATGGTGGTAATTTCCAAGGAACCCCAATTGGAGTTTCAATGGATAATGCACGTTTAGCTGTTGCTTCAATTGGCAAACTCATCTTTGCCCAATTTACTGAGCTAGTCAATGATTTGTATAACAATGGGTTGCCATCAAATCTTTCTGCTGGTAGAAACCCAAGTCTGGATTACGGTTTCAAGGCATCTGAAGTTGCCATGGCTGCTTATTGTTCTGAACTTCAATATCTAGCAAATCCAGTAACGAGCCATGTGCAAAGTGCTGAGCAGCACAACCAAGATGTGAACTCTTTGGGCTTAATTTCTGCTTTGAAAACTGTCGAAGCCGTTGAGATATTAAAGCTCATGTCTTCGACTTATCTGGTTGCACTCTGCCAAGCTATTGACTTGAGGCATTTGGAGGAAAATTTCAAGAGTACGGTCAAGAATACTGTAAGCAGAGTTGCACAGAAAACATTAATTACAGAAGGCAAAGAAGAAATTAACCCATTTCGACTTTGTGAGAAAGATTTGCTTAAAGTGGTCGATAGAGAGTACGTATTTTCCTACATTGATGATCCCTCCAATGTTACGTACCCCTTGATGCCAAAACTAAAGCAAGTACTTTATGAGAAAGCACACATCAGTGCCATTAATGACAAGAATGTGAGCTTGTTGATTTTTGAGAAGATAGGAGCTTTTGAGGATGAATTGAAGTCTCTCTTGCCAAAGGAAGTTGAAAATGCAAGGGTAGCTTATGAGAATGGCAATCCAGCAATTCCAAACAGAATAAAGGAGTGTAGGTCATATCCACTGTACAAGTTTGTGAGGGAGGAGTTAGAGATAGGGTTGCTCACCGGAGAAAAGAATCTCTCACCCGATGAGGAATTTGAAAAAGTATATACAGCCATGTGTCAAGCAAAGATTGTTGACCCAATTCTGGAATGTCTTGGAGATTGGAAAGGGTCTCCCATCCCAATATAA 2112 0.4285 MATIILENDPLNWSHAADSLKGSHFEEVKRMVAEYRKPLISLGGGETLTISQVAAVAVANANHNLQAKVDLSESARAGVDASCDWITQNINKGTPIYGVTTGFGAASHRQTQQGLALQKEMVRFLNCAIFGYQTELSHTLPKSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNVTPILPLRGTVTASGDLIPLSYIVALLTGRRNSKAVGPSGESLNAKEAFHLAGLHSGFFELKPKEGVALVNGTAVGSGVASTVLFEANILALLSEVLSAVFAEVMQGKPEFTHHLIHKLKYHPGQIEAAAIMEHILDGSSYVKDAKLQQPDPLQKPRKDRYALVTSPQWLGPQIEIIRYSTKSIEREINSVNDNPLIDVTRNKALNGGNFQGTPIGVSMDNARLAVASIGKLIFAQFTELVNDLYNNGLPSNLSAGRNPSLDYGFKASEVAMAAYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISALKTVEAVEILKLMSSTYLVALCQAIDLRHLEENFKSTVKNTVSRVAQKTLITEGKEEINPFRLCEKDLLKVVDREYVFSYIDDPSNVTYPLMPKLKQVLYEKAHISAINDKNVSLLIFEKIGAFEDELKSLLPKEVENARVAYENGNPAIPNRIKECRSYPLYKFVREELEIGLLTGEKNLSPDEEFEKVYTAMCQAKIVDPILECLGDWKGSPIPI 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02890 703 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 187 203 IPR022313 GO:0016841
Gma02g02890 703 PANTHER PHENYLALANINE AMMONIA-LYASE 5 703 - -
Gma02g02890 703 Pfam Aromatic amino acid lyase 48 523 IPR001106 -
Gma02g02890 703 SUPERFAMILY L-aspartase-like 9 703 IPR008948 GO:0003824
Gma02g02890 703 PANTHER HISTIDINE AMMONIA-LYASE 5 703 IPR001106 -
Gma02g02890 703 CDD PAL-HAL 67 514 IPR001106 -
Gma02g02890 703 Gene3D - 2 251 IPR024083 -
Gma02g02890 703 Gene3D Fumarase/aspartase (Central domain) 252 698 - -
Gma02g02890 703 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 9 693 IPR005922 GO:0005737|GO:0006559|GO:0016841
Gma02g02890 703 Gene3D - 517 638 IPR023144 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02890 Gma-Chr2 54282407 54284976 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02890 4 703 Monolignol Biosynthesis Gene Families AT2G37040 72.792 0.0 1079
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02890 K10775 - gmx:100787872 1372.84