Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02867 ATGCAGGCATCAGAGCAACATAGAAATTCAAGTATGTACTATCAACCATTACAACAAATTGAAGCGTACTGCTTGCCGCAGTATCGGACACTAAATCCGCAGCTATACTACCATGATGGAGGCCATGGAACTCAGTTTTCAACTCCAAGTTCTTCAGAACTTTACTGCACTTTGGAGTCATCTTCTGTAGCTCTTTACAACTCCCCTTCAACTGTTAGTTTCTCACCCAATGGTAGCCCCATATCGCAGCAAGACTCTCAGTCATATCCACCTGACCAGTATCATTCCCCTGAGAATACCTATGGCTCTCCTATGAGTGGCTCCTGCATAACTGATGATTTAAGCAGCTTCAACTTGAAGCACAAGCTGAGAGAGTTGGAAAGTGTAATGCTTGGCCCTGACTCTGATAATCTTGATAGTTATGACAGTGCCATCAGCAATGGAAACAACTTTGTTCCACTAGAGATGGACGGTTGGAAACAAACAATGGTGGCAATTTCTAGCAAAAACCTAAAGCATATCCTTATTGCATGTGCCAAAGCCATTTCAGACGATGATTTGCTAATGGCACAGTGGCTGATGGATGAATTAAGACAGATGGTGTCAGTTTCTGGCGATCCGTTTCAGCGGTTGGGAGCATACATGTTGGAAGGACTTGTTGCGCGATTGGCTGCCTCTGGGAGTTCAATATACAAATCTTTAAGATGCAAAGAACCAGAAAGTGCTGAGCTTCTCTCCTACATGCACATACTGTATGAGGTTTGCCCCTACTTCAAATTTGGGTACATGTCTGCAAATGGAGCCATTGCGGAAGCAATGAAAGATGAAGACAGAGTTCACATAATTGATTTCCAAATTGGTCAAGGAAGTCAGTGGATCACTTTAATTCAGGCTTTTGCAGCTAGACCTGGAGGGCCACCCCACATCCGGATTACTGGTATTGATGATTCAACATCAGCATATGCCCGCGGTGGCGGACTACACATAGTGGGAAGGAGGTTATCAAAGCTTGCTGAGCATTTTAAGGTGCCATTTGAATTTCATGCTGCAGCTATCTCAGGTTGTGATGTTCAACTACATAACCTTGGAGTACGACCAGGGGAAGCTCTGGCTGTAAACTTTGCGTTCATGCTACATCACATGCCGGATGAAAGTGTGAGTACTCAGAATCACAGGGATAGGCTGTTGAGGTTGGTTAGGAGCCTATCACCAAAGGTGGTCACACTTGTTGAGCAAGAATCTAACACCAACACTGCTGCATTCTTTCCACGTTTCCTTGAAACTCTGGACTATTACACAGCAATGTTTGAGTCAATAGATGTGACTCTTTCCAGAGAGCATAAAGAGAGAATCAATGTTGAGCAACATTGTTTGGCAAGAGACTTGGTTAACATCATAGCTTGTGAAGGGGTCGAGAGGGTGGAACGACATGAGGTGCTCGGCAAGTGGAGGTCAAGATTTGCAATGGCCGGTTTCACTCCTTACCCTTTAAGTTCATTGGTGAATGGTACCATCAAGAAGTTGCTCGAGAACTACAGTGATAGATATAGACTTCAAGAGAGAGATGGAGCTCTTTATCTGGGTTGGATGAATAGAGATTTGGTTGCTTCTTGCGCTTGGAAATGA 1626 0.4422 MQASEQHRNSSMYYQPLQQIEAYCLPQYRTLNPQLYYHDGGHGTQFSTPSSSELYCTLESSSVALYNSPSTVSFSPNGSPISQQDSQSYPPDQYHSPENTYGSPMSGSCITDDLSSFNLKHKLRELESVMLGPDSDNLDSYDSAISNGNNFVPLEMDGWKQTMVAISSKNLKHILIACAKAISDDDLLMAQWLMDELRQMVSVSGDPFQRLGAYMLEGLVARLAASGSSIYKSLRCKEPESAELLSYMHILYEVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSTSAYARGGGLHIVGRRLSKLAEHFKVPFEFHAAAISGCDVQLHNLGVRPGEALAVNFAFMLHHMPDESVSTQNHRDRLLRLVRSLSPKVVTLVEQESNTNTAAFFPRFLETLDYYTAMFESIDVTLSREHKERINVEQHCLARDLVNIIACEGVERVERHEVLGKWRSRFAMAGFTPYPLSSLVNGTIKKLLENYSDRYRLQERDGALYLGWMNRDLVASCAWK 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02867 541 ProSiteProfiles GRAS family profile. 162 541 IPR005202 -
Gma02g02867 541 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 541 IPR005202 -
Gma02g02867 541 MobiDBLite consensus disorder prediction 74 102 - -
Gma02g02867 541 PANTHER SCARECROW-LIKE TRANSCRIPTION FACTOR PAT1 15 541 - -
Gma02g02867 541 Pfam GRAS domain family 171 541 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02867 Gma-Chr2 54081862 54085381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02867 12 541 GRAS Transcription Factor Family AT5G48150 65.858 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma02g02867 GRAS 2.8e-138 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02867 - - gmx:100796496 1077.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00066 14 556247 557884 Gma02g02867 02 54081862 54085381 GST