Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02865 ATGTCTGTGAATCGAAGGCTTCCTGCTTCAAATGGTAGATTGCTATCAAATATGAAGTCTTGGAAGCTGAATGAGCCTCTGCATGGGTCTAATTGTCCCAGGGCATGCAGGAGGAAGCCCTTGCTTCTTTGGTTTTTTGGCTTTGTTGCCATAGGGAGTGTTTGGTTCATCTTGAGTTTCAATAGTAAGTATTTGATGAGCAAGGAGAATGAAGCAATTTGTGAAGAGAGAGAGAGAATCTTGCTACAACGTTACAATGTTAGTAGGAAACAGATTCATGCTTTGGCTTCCTTGCTCTCTGGATCAGATCAGATTTTATCCAACTGCATTGATGAAAGAAGACTTCAAATGCTGCTAGGCAGCGGCATGGTTAGCACTCCACAGTTAATGTGTCCGGAGAATCAGGAGTTACAAAAGGAGCATACATGTGTTGCAGACACTGTAGAACCTATAGAACAATGCCCAATTCTTGATGATTATGTCCAGACAAGGCTCGAATTATCATTCCCATTGAAAAATTATGTATCATTGGCCTTGCGCTCTGCACTTTCAACTGATTTGGTTAGTTATTTGCACCGCGGAAAGAACACTGTGCAATCATGGGAACTGAGGGCATCTGCAATTCGGTATCATGTGAGTTCATCTAATTTAATTAAAGGATGCTGGTGGGTCATTGGAATTATAATGTCCTACTTCTGTTTACTATGGAGGAGTCAAAAGCAGAAGCTAGTTCAGGGGCATCCAGGTGCACAACAAAAGCAGTTGAAACATTTTCTAAGGGGTCCTTCAAGGGGTACTGGGAGGTGGAGGAAAAAGTTACTAGTTATATTTGTGTCACTTGGAATTATCGGGTCCTTTTGGTTATTTTGGCACCTGAATACGGGCATTATGCAGAGAAGAGAAGAAACACTAGCAAATATGTGTGATGAGAGAGCCCGTATGCTGCAAGATCAGTTTAATGTGAGCATGAACCATGTTCATGCTCTGGCTATCCTTGTATCTACCTTTCACCATGGTAAACATCCTTCTGCAATTGACCAGAAAATTTTTGGAGAATATACAGAGAGTACAGCATTTGAAAGACCACTTACTAGTGGTGTTGCTTATGCTTTGAAAGTTCTCCACTCTGATAGGATGCATTTTGAGAAGCAGCATGGGTGGACAATTAAGAAAATGGAAACTGAGAATGAGGCATTAGTCCAAGATTGTATTCCTGAAAAATTGGATCCAGCACCCATTCAAGATGAATATGCACCAGTGATATTTGCTCAAGAAACAGTTTCCCATATTGTATCTATTGACATGATGTCAGGGAAGGAGGACCATGAGAATATTTTGAGAGCAAGGGCATCTGGAAAGGGGGTTCTGACATCCCCTTTTAAACTACTAAAGTCCAATCACCTGGGTGTTGTACTTACATTTGCTGTCTATAACACTAATCTTCCTTTAGATGCTACACCGGAGCAGCGTACCGAAGCTACTGTGGGGTATCTGGGTGCATCTTATGATGTTCCATCACTGGTGGACAAGCTTCTGCACCAACTTGCCAGTAAACAAACCATTGTTGTAAATGTTTATGACACAACTAATGCATCTGCACCAATCACAATGTATGGTACAGATGTTGCTGACACTGGCCTACTACACATAAGCAGCCTAGATTTTGGGGATCCGCTACGAAAACATGAGATGCACTGCAGGTTCAAGCAGAGGCCTCCATTACCTTGGACAGCAATCAATGCATCAGTGGGGGTGTTTGTTATTACTTTGCTTCTGGGTCATATTTTTTATGCAGCAATTAATAGAATAGCAAAAGTTGAGGCTGACTATCGTCAAATGAGAGAGCTGAAAGTTCGTGCTGAAGCTGCAGATGTGGCAAAATCTCAGTTTCTTGCAACAGTTTCACATGAGATCAGGACTCCAATGAATGGTGTTTTAGGTATGCTGCAAATGTTGATGGATACTGAGCTTGATGAAAACCAGATGGACTGTGCCCAAACCGCCCACAAGAGTGGTAAAGATCTTATCTCAGTCATAAGTGAGGTTCTCGATCAGGCTAAGATTGAGGCAGGAAAGCTTGAACTTGAAGCTGTAGCCTTTGATCCACGAGCTATTCTTGATGAAGTTTTATCACTTTTCTCTGAAAAATCTAATGAAAAAGGAATAGAGCTGGCTGTTTATGCATCCAATCAAGTACCCAAAGTTGTCATTGGCGATCCTAAACGGTTCCGGCAAATAATTACTAATCTTGTTGGCAATTCACTTAAGTTTACTCATGATAAAGGGCATGTATTTGTCTCTGTTCATCTGGCGAGTGAAGTGAAAAACCCACTTCATATTATGGACGCAGTGCTGAGAGAAGGCTTAAACTTAAGCCAGGACATAACAAACAGAACATATGATACGTTAAGCGGGTTTCCTGTATGCAACAGATGGAAAAGTTGGGCCAATTTTACGAAGTTAAGTGGCACAAATGAGCCTGAAATTATTCAACTTCTAGTAATAGTTGAGGACACAGGTATAGGAATTCCTACAGATGCACAAAGCCGCATATTCACACCTTTTATGCAGGCTGACAGTTCCACCTCCCGAACATATGGTGGAACTGGAATAGGACTGAGCATTAGTAGATGTCTAGTTGATCTCATGGGAGGAGAAATTGGATTTGTAAGTGAGCCTGGAATTGGAAGTACTTTTTCCTTTACTGGAACTTTCAGAAAAGGAGAAAGCACGTCTCTGGATGCAATGCGGCAGAATAATCATTTTGGTTCAGAGTTCCAAGAATTGAGAACATTAGTGGTAGATAGAAGAAAAATCCGAGCTGAGGTCACAAAATATCATCTGCAGAGATTGGGAATGTCCGTGGATGTAACTTACAGTCTGAATTCTGCATGCTCTTGTCTATCTAATGTGTGTAACATGAGTATGTTGGCCATGATTCTTATTGACAAGGATGCTTGGGATAAAGAATATCATATCTTATACACAATCAAGAAACGTAGACAGAATGGCATCAAAGGGGATCCATTGAATTTACCAAAGATTTTTCTCCTAGCTACCCACCTTAGCTCCAATGAACAGGATGAGCTCAAGTCAGTTGGTGTCATAGATGATATATTAATGAAGCCTCTATGGTTTAGTTCTTTGATTCAGTGTTACAGAGAATCCCTTGGCACTGAAAACAAGCGAGTAAATAGGAAAAAAGTATCCAAACTTGGGAATTTATTAATTGACAAACAAATTTTGGTGGTTGATGATAATGCAGTGAACAGAAGAGTTGCAAAAGGTGTTCTACAGAAATATGGGGCTAAAGTGACTGCTGTGGAGAGTGGCAGGGCTGCTCTAAAGATGCTTGAGCTGCCACATAATTTTGATGCTTGTTTCATGGATCTCCAAATGCCAGAAATGGATGGTTTTGAAGCGACGAGGAAAATCCGTTGTCTGGAGAGTGAGGTAAATGAGAAAATTGCATGTGGGCAAGCATCTGCAGAGATGTTTGGTAACATCTCTTATTGGCACATTCCGATACTAGCAATGACAGCAGATTCAACTCAGTCTTCCAATGAAGAGTGCATAAAACACCCTGCTCACAAGTGTGGACTGACCTCCAGTGTGATGTGTAATATTGTAATGGTTGGACATGCCCCAGCTGATGTGTTCCTAATTGAGACTGCTTGCCAGCATCAAAGCTATCAATTCAGCATCATGGATCTCACCTATGGTCTTGTTTAG 3732 0.4124 MSVNRRLPASNGRLLSNMKSWKLNEPLHGSNCPRACRRKPLLLWFFGFVAIGSVWFILSFNSKYLMSKENEAICEERERILLQRYNVSRKQIHALASLLSGSDQILSNCIDERRLQMLLGSGMVSTPQLMCPENQELQKEHTCVADTVEPIEQCPILDDYVQTRLELSFPLKNYVSLALRSALSTDLVSYLHRGKNTVQSWELRASAIRYHVSSSNLIKGCWWVIGIIMSYFCLLWRSQKQKLVQGHPGAQQKQLKHFLRGPSRGTGRWRKKLLVIFVSLGIIGSFWLFWHLNTGIMQRREETLANMCDERARMLQDQFNVSMNHVHALAILVSTFHHGKHPSAIDQKIFGEYTESTAFERPLTSGVAYALKVLHSDRMHFEKQHGWTIKKMETENEALVQDCIPEKLDPAPIQDEYAPVIFAQETVSHIVSIDMMSGKEDHENILRARASGKGVLTSPFKLLKSNHLGVVLTFAVYNTNLPLDATPEQRTEATVGYLGASYDVPSLVDKLLHQLASKQTIVVNVYDTTNASAPITMYGTDVADTGLLHISSLDFGDPLRKHEMHCRFKQRPPLPWTAINASVGVFVITLLLGHIFYAAINRIAKVEADYRQMRELKVRAEAADVAKSQFLATVSHEIRTPMNGVLGMLQMLMDTELDENQMDCAQTAHKSGKDLISVISEVLDQAKIEAGKLELEAVAFDPRAILDEVLSLFSEKSNEKGIELAVYASNQVPKVVIGDPKRFRQIITNLVGNSLKFTHDKGHVFVSVHLASEVKNPLHIMDAVLREGLNLSQDITNRTYDTLSGFPVCNRWKSWANFTKLSGTNEPEIIQLLVIVEDTGIGIPTDAQSRIFTPFMQADSSTSRTYGGTGIGLSISRCLVDLMGGEIGFVSEPGIGSTFSFTGTFRKGESTSLDAMRQNNHFGSEFQELRTLVVDRRKIRAEVTKYHLQRLGMSVDVTYSLNSACSCLSNVCNMSMLAMILIDKDAWDKEYHILYTIKKRRQNGIKGDPLNLPKIFLLATHLSSNEQDELKSVGVIDDILMKPLWFSSLIQCYRESLGTENKRVNRKKVSKLGNLLIDKQILVVDDNAVNRRVAKGVLQKYGAKVTAVESGRAALKMLELPHNFDACFMDLQMPEMDGFEATRKIRCLESEVNEKIACGQASAEMFGNISYWHIPILAMTADSTQSSNEECIKHPAHKCGLTSSVMCNIVMVGHAPADVFLIETACQHQSYQFSIMDLTYGLV 1243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02865 1243 Pfam His Kinase A (phospho-acceptor) domain 626 691 IPR003661 GO:0000155|GO:0007165
Gma02g02865 1243 Gene3D - 923 1060 - -
Gma02g02865 1243 SMART HisKA_10 626 691 IPR003661 GO:0000155|GO:0007165
Gma02g02865 1243 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 612 692 IPR036097 GO:0000155|GO:0007165
Gma02g02865 1243 Gene3D - 1061 1199 - -
Gma02g02865 1243 SMART CHASE_2 341 540 IPR006189 -
Gma02g02865 1243 Gene3D - 597 689 - -
Gma02g02865 1243 CDD HATPase_EvgS-ArcB-TorS-like 743 902 - -
Gma02g02865 1243 Pfam CHASE domain 344 538 IPR006189 -
Gma02g02865 1243 ProSiteProfiles CHASE domain profile. 341 565 IPR006189 -
Gma02g02865 1243 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 738 902 IPR003594 -
Gma02g02865 1243 ProSiteProfiles Response regulatory domain profile. 930 1057 IPR001789 GO:0000160
Gma02g02865 1243 SMART REC_2 1079 1210 IPR001789 GO:0000160
Gma02g02865 1243 ProSiteProfiles Histidine kinase domain profile. 633 907 IPR005467 -
Gma02g02865 1243 SUPERFAMILY CheY-like 1079 1196 IPR011006 -
Gma02g02865 1243 SMART HKATPase_4 738 907 IPR003594 -
Gma02g02865 1243 CDD REC_hyHK_CKI1_RcsC-like 1081 1192 - -
Gma02g02865 1243 PANTHER HISTIDINE KINASE 2 260 1193 - -
Gma02g02865 1243 PANTHER TWO-COMPONENT HISTIDINE KINASE 260 1193 - -
Gma02g02865 1243 CDD HisKA 626 687 IPR003661 GO:0000155|GO:0007165
Gma02g02865 1243 Gene3D - 63 102 - -
Gma02g02865 1243 Gene3D - 292 344 - -
Gma02g02865 1243 SUPERFAMILY CheY-like 926 1057 IPR011006 -
Gma02g02865 1243 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 681 902 IPR036890 -
Gma02g02865 1243 Pfam Response regulator receiver domain 1081 1152 IPR001789 GO:0000160
Gma02g02865 1243 Gene3D CHASE domain 345 572 IPR042240 -
Gma02g02865 1243 Gene3D - 690 908 IPR036890 -
Gma02g02865 1243 Coils Coil 603 623 - -
Gma02g02865 1243 PRINTS Bacterial sensor protein C-terminal signature 867 885 IPR004358 GO:0016310|GO:0016772
Gma02g02865 1243 PRINTS Bacterial sensor protein C-terminal signature 850 860 IPR004358 GO:0016310|GO:0016772
Gma02g02865 1243 PRINTS Bacterial sensor protein C-terminal signature 832 846 IPR004358 GO:0016310|GO:0016772
Gma02g02865 1243 PRINTS Bacterial sensor protein C-terminal signature 891 904 IPR004358 GO:0016310|GO:0016772
Gma02g02865 1243 ProSiteProfiles Response regulatory domain profile. 1080 1230 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02865 Gma-Chr2 54050653 54060664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02865 37 160 Miscellaneous Gene Families AT5G35750 28.859 2.72e-06 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma02g02865 CHASE 2.8e-33 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02865 K14489 - gmx:100781655 2375.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00070 14 578360 589555 Gma02g02865 02 54050653 54060664 GST