Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02859 ATGGCTCAAGTTCAGGTTCCGCCTCAGAATGCGGTTCCCGACCCCAACGGTGGTGGTGCTGCTGGAAATCAGTTCGTGACGACGTCGCTTTATGTTGGAGATCTCGACCCGAACATCATGGACGCCCAGCTGTATGATTTGTTCAACCAATTGGGACAAGTCATATCCGTTAGGGTTTGTAGGGACTTGACCAGTAGGAGATCGCTCGGTTATGGTTATGTCAACTTTAGCAACCCGCAAGATGTTGTCGTCCTTCTCTCCTGTTACATATTCATCCGGTTGCCTTGA 288 0.5 MAQVQVPPQNAVPDPNGGGAAGNQFVTTSLYVGDLDPNIMDAQLYDLFNQLGQVISVRVCRDLTSRRSLGYGYVNFSNPQDVVVLLSCYIFIRLP 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02859 95 PANTHER RNA BINDING PROTEIN 18 81 - -
Gma02g02859 95 SMART rrm1_1 29 93 IPR000504 GO:0003723
Gma02g02859 95 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 28 95 IPR000504 GO:0003723
Gma02g02859 95 SUPERFAMILY RNA-binding domain, RBD 3 84 IPR035979 GO:0003676
Gma02g02859 95 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 30 82 IPR000504 GO:0003723
Gma02g02859 95 Gene3D - 3 89 IPR012677 -
Gma02g02859 95 PANTHER POLYADENYLATE-BINDING PROTEIN 2 18 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02859 Gma-Chr2 54015458 54015745 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02859 1 94 Eukaryotic Initiation Factors Gene Family AT4G34110 52.830 2.61e-28 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02859 K13126 - gmx:100813735 163.31