Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02857 ATGGGGGATGGTGGCCTTAAGCCAATTGCTTTTGCTTATAGACAAACAGATGGAGAACAACTTGAGCAAGAAGAACTGATCTTGTTAGGACTGATAGGTCTCAAATGCACTACTAGTCTTGAATCCATAAAATCAGCTTTGGAAAATCTCAGAAATGATGCAAATATACAGATCAAACTGGTCTCGGAGGATGACATCATGGAAGTGAAAGCCATAGCTTGTGGACTAGGACTAGAACATGTGCTTGCAAGAGAAAGTGTATTGGAACCAATTGTGATGGCTGGCAGAAGTCAATACCACAATATTCAGAAGTTCATTCAACTTCAGCTGACATGTACCATATCAGGGTCACTCATAACCCTGGTCACAACATGTACTGGAGATTCCCCCCTTGCAGCATTCCAGTTGATTTGGGCGAATGTCTTGATGTGCATTCTGGGTGGCCTAAAGATGGCATTGAAGCTAACGGGCGAGGAACAGCTTGCTGAACAACCCTCTCATCACAGTAACCAACATATTATAACCAAAGAAATCAGGAAAAACATTGTTATTCAGGTTTTATATCAGGATCAGGCTTCTGTGTCAATGATACTCGAGTTCGGTGGACATGCTACTGACAGGGAAAAAAGGTTAGGGAAACCATGA 645 0.4233 MGDGGLKPIAFAYRQTDGEQLEQEELILLGLIGLKCTTSLESIKSALENLRNDANIQIKLVSEDDIMEVKAIACGLGLEHVLARESVLEPIVMAGRSQYHNIQKFIQLQLTCTISGSLITLVTTCTGDSPLAAFQLIWANVLMCILGGLKMALKLTGEEQLAEQPSHHSNQHIITKEIRKNIVIQVLYQDQASVSMILEFGGHATDREKRLGKP 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02857 214 Gene3D - 82 211 - -
Gma02g02857 214 SUPERFAMILY Calcium ATPase, transmembrane domain M 93 191 IPR023298 -
Gma02g02857 214 PANTHER CATION-TRANSPORTING ATPASE PLANT 1 81 - -
Gma02g02857 214 PANTHER CATION-TRANSPORTING ATPASE PLANT 85 210 - -
Gma02g02857 214 PANTHER CATION TRANSPORTING ATPASE 1 81 - -
Gma02g02857 214 PANTHER CATION TRANSPORTING ATPASE 85 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02857 Gma-Chr2 54013204 54014108 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02857 91 202 Primary Pumps ATPases AT5G57110 39.823 1.20e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02857 K01537 - gmx:102661547 199.519