Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02853 ATGGAAGCAAACAAGGAGGAAGCACTTAAAGCGATAGAGATTGCTGAAAAGCGATTTGCTCTGAGAGACTTTGCCGGTGCAAAAAACTATGCTGTAAAGGCTAAAACACTCTGTCCAGGATTGGAGGGTATATCTCAAATGGTGGCCACATTTGAAGTTTACGTTGCTTCTGAGGTCAAACATAATGGTGATCTAGATTACTATTCGATTCTTGGATTAAAACCTTTTGCAGATAAGGAGGCTGTGAAGAAACAGTACAAGAAGTTGGCAGTGTTGCTTCACCCAGATAAGAACAAATGTGTGGGAGCTGATGAGGCATTTAAGCTTGTTTCTGAGGCTTGGACTTGGCTATCAGATAGTGCTATGCGCAGTTCTTATGATCTCAAGAGAAATGTGCAGCTGGGTGGGGCTAACCAGACAAATTTGTCTCCTGCCCATGCTACAGGGACTGCAGGTTATACCAAATGTTCCAATTTGCCAACCCCTTGTGGTAGGCTTGACACCTTTTGGACAATCTGCACCTCTTGTAAGGTTCAGTATGAGTATCTGCGCAAGTATGTGAATAAAAGACTCTCTTGTAAGAACTGTCGTGGCACTTTTGTTGCTGTTGAAACTGGGGCGGCCCCAGCAAATGGTTCGTTTCCATATTGTCCTTGGTCATATGTGGCAGGAAATGGGTATGGAAGTCATTCATTTGATGGAGTTACATATGTTCCAACTAGTGCCCCCTATTTCAATGGGAATGGGGTCACAGGGTACCATTCTGGACATGGTTATGAGTACGTTCCAAATGTTTCATTTCAGTGGGGCTCTGCTGGAGTTGTCAACCAAAATGGATCAACTACCTTACCTGCTGATTCTGTTCATCGGGCCAATGGAAATGTGAAGAGGGGAAGGCCAAAAGTCAAGTTGGGAGCTGATAAGAGGCATCATGTGATAGAGACTATGGTCAATACAAATTCAGATGTACCATTCTCCTGTAGTGAACCACAGGAAGATAAACTAAGTAGACCTGACAAGAAACAGAAAGTTGTTGTGGGAGCCAGTTTCAGAAATGGCTATGAAGAAAAGGGTTCAAAATGTGCTTCAGAGTTGATAGTGGCTAACGGAAATGATAGCATGGGACATGGCCAAAAGCCTTCCTGCACAGTCGAAGTTCAAACCAAACAGTGTTCCATGGCACCAGCATTTGACGCAAGAAAATTATTGATTGAGAAAGCCAGGAAAGAAATCAGGAAGAAACTGGAGGAGATGAAGTTGTCGTCTGCAGCAGCTGCTGCTGCAGCTCTGAATGAGAAAGAAAAATCACAAGCTGAAGTTGGTAAAGTAAAAAGAGAGACATGTAGAAAAGCAGCTCCGAATGTTTCTGGTCTACAATTAGAGAATGGGAAAACTGGTCCAGTCTCAATTACTGTCCCAGATTCTGACTTTCATGACTTTGACAAAGATAGGTCAGAGGAATGCTTCAGGCCAAAGCAAATATGGGCCTTGTATGATGAGGAAGATGGAATGCCACGGTTGTATTGTATGATCCGTGAGGTTGTGTCTGTCAATCCATTTAAGATTCACATCAGTTACTTGAGTTCCAAAACTGATAGTGAGTTTGGCTCAGTAAACTGGCTTGATTCAGGTTTTACCAAATCTTGTGGAAATTTCAGGGCTTTCAATTCAGATGCTGTTGATCAAGTTAACATATTTTCTCATGTTCTAAATAAGGAGAAGGCTGGTCGAGGTGGTTGTGTCCGAATATATCCTAGAAGTGGAGATATTTGGGCTGTGTATCGAAATTGGTCGCCAGATTGGAGCAGATCTACTCCAGATGAAGTGAGGCATCAGTATGAAATGGTTGAGGTGCTGGATGATTACTCTGAGGAACTTGGTGTTTGTGTTAGTCCTCTTATTAAGTTGGCTGGATTTAAAACGGTATATCAGAGTAATACAGACAAGAGTACCATAAAATGGATACCCAGAAGAGAGATGTTGCGCTTTTCACATCAAGTGCCTTCTTGGTTACTGAAGGGGGAAGCTAGCAATTTGCCTGAAAGGTGTTGGGACCTTGATCCGGCTGCAACTCCAGATGAGCTTCTTCATGCTGCTACAGAACCAAATGCTTTGTAG 2118 0.4297 MEANKEEALKAIEIAEKRFALRDFAGAKNYAVKAKTLCPGLEGISQMVATFEVYVASEVKHNGDLDYYSILGLKPFADKEAVKKQYKKLAVLLHPDKNKCVGADEAFKLVSEAWTWLSDSAMRSSYDLKRNVQLGGANQTNLSPAHATGTAGYTKCSNLPTPCGRLDTFWTICTSCKVQYEYLRKYVNKRLSCKNCRGTFVAVETGAAPANGSFPYCPWSYVAGNGYGSHSFDGVTYVPTSAPYFNGNGVTGYHSGHGYEYVPNVSFQWGSAGVVNQNGSTTLPADSVHRANGNVKRGRPKVKLGADKRHHVIETMVNTNSDVPFSCSEPQEDKLSRPDKKQKVVVGASFRNGYEEKGSKCASELIVANGNDSMGHGQKPSCTVEVQTKQCSMAPAFDARKLLIEKARKEIRKKLEEMKLSSAAAAAAALNEKEKSQAEVGKVKRETCRKAAPNVSGLQLENGKTGPVSITVPDSDFHDFDKDRSEECFRPKQIWALYDEEDGMPRLYCMIREVVSVNPFKIHISYLSSKTDSEFGSVNWLDSGFTKSCGNFRAFNSDAVDQVNIFSHVLNKEKAGRGGCVRIYPRSGDIWAVYRNWSPDWSRSTPDEVRHQYEMVEVLDDYSEELGVCVSPLIKLAGFKTVYQSNTDKSTIKWIPRREMLRFSHQVPSWLLKGEASNLPERCWDLDPAATPDELLHAATEPNAL 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02853 705 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Gma02g02853 705 PRINTS DnaJ domain signature 68 86 IPR001623 -
Gma02g02853 705 PRINTS DnaJ domain signature 86 101 IPR001623 -
Gma02g02853 705 PRINTS DnaJ domain signature 102 122 IPR001623 -
Gma02g02853 705 CDD DnaJ 66 119 IPR001623 -
Gma02g02853 705 PANTHER BNAC03G44070D PROTEIN 1 698 - -
Gma02g02853 705 Gene3D DnaJ domain 54 148 IPR036869 -
Gma02g02853 705 Pfam DnaJ domain 66 127 IPR001623 -
Gma02g02853 705 Coils Coil 426 446 - -
Gma02g02853 705 Coils Coil 404 424 - -
Gma02g02853 705 SUPERFAMILY Chaperone J-domain 59 131 IPR036869 -
Gma02g02853 705 SMART dnaj_3 65 122 IPR001623 -
Gma02g02853 705 Pfam Domain of unknown function (DUF3444) 469 675 IPR024593 -
Gma02g02853 705 PANTHER BNAC03G44070D PROTEIN 1 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02853 Gma-Chr2 53988738 53990855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02853 4 301 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.630 9.25e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02853 - - gmx:100792639 1432.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00085 14 697216 701024 Gma02g02853 02 53988738 53990855 GST