Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02850 ATGTCTTCTACTTCTTCTTCGTCGTCGTCATCATCATCATCTACTTCTTCTTCAACTCCATATGACGCTGTTGCCCCTGATATCCCTGGCCCTAGTACGAGGAGAACCGGTGGTAGTGGTCAATTTGAAGCTTCTTCCTCCTCTCAACGTCAACGTGCTATGAACGAGGTCTTGCCTGAACCTTTACTTGAAGCTTTGGCCACCCAACTTGCCCTTGATGCTGCCAACTACAATGGTCGTCTTTCTGCTGCTTCTGCCCTTGCCATTTTATTTCAGGTTTGTTCCACGTGGCGAGAGGTGTCGCGGTCGGATCTGCTGTGGCAGCGGCTCACGAGACGCATCTGGAGACGCACCTATCAACTGAGGGCCACGTGGCAGCTGGAGTACATGTATTGGCATCGGACGGCCAGGAACTTCTCGACAGGGAGACACAGGTTTTTCGACCAAGCAGTGTTCGACCCTTCGGATCATCACCACCATCTGCTCTGTCGCTGCCTCGCCCTGTCCGACACTCACCTGGCGTGCGGCTTCGTCGACGGCTCCGTGCGTCTCTTCGACCTCGAAACCCGAGCCCACGTCACCACCTTCTTGTCTCTACACGGCCACCTCTTTGGGCCCTTCTCGCGCTCCGTCTCGGGCATCGTTATAATCAACTCCAGCATCACCTTCGCCAGGCTGGATGGGGATATTTACGTGGATAATGTGGACGGGCCTGGGCCCATTCAGGCTCGCCGGGCCGTGGAAGGTGACGTGGTCAACAACGGGGTGTTGGTTGGGTTCGCGGGAACGGGGCGGTGGTGGGTTGGCCTCTACGCGGGAATAGCGGGCCGGGCTTTTCAGATATGGGACGCGCGCAGTGAAGAGCGCGTGTTCGTTGGTGGGTCTTTGACGGATCCAGAAACGGTTATGGGGTGGCACATGCTGACGGAGCTAGTTGAAGCCGTGGGTCGCGTGCGCGTGACGGAGCGTGAGTATGTGGTGGCGTGCACGGCTTCGAGGATGGTTTGTTTCAGTTTTCGGAACCCGGAGGTGTTGTTGCGGGACGTGGGGTCCACGATGGGGTTCGTGGTGAGTTCGCTGGACGCGAGTCAGGAGGCCTATGTAGTGTTGGAGAGGAACGGCGTGGGAACGGTTCGGCGAGCGAGCACGTATGAGCGGTTGAGCCGGTTTCGGTTAAACCGGTTATGGGTTCGGGGGTTGTGGGCCTGCATGAACCTTGGCTACGTCTTAACCTATTCGCCTGCGCCTTCTCCTTCGCCTTCCTTGAGGGTTTGGGACATTGAGCAAGCCATAGGACGCTTGTGTGTCACTCTTGGGGTCAGAGCTGGATACGTTAATAGCTTGGTGGCAAATGACAGACACGTCTCTATCTCTTCCAATGACAATAACATTAACTTATTGGATTTTGGTGTACAGGATCCTTAG 1425 0.5607 MSSTSSSSSSSSSSTSSSTPYDAVAPDIPGPSTRRTGGSGQFEASSSSQRQRAMNEVLPEPLLEALATQLALDAANYNGRLSAASALAILFQVCSTWREVSRSDLLWQRLTRRIWRRTYQLRATWQLEYMYWHRTARNFSTGRHRFFDQAVFDPSDHHHHLLCRCLALSDTHLACGFVDGSVRLFDLETRAHVTTFLSLHGHLFGPFSRSVSGIVIINSSITFARLDGDIYVDNVDGPGPIQARRAVEGDVVNNGVLVGFAGTGRWWVGLYAGIAGRAFQIWDARSEERVFVGGSLTDPETVMGWHMLTELVEAVGRVRVTEREYVVACTASRMVCFSFRNPEVLLRDVGSTMGFVVSSLDASQEAYVVLERNGVGTVRRASTYERLSRFRLNRLWVRGLWACMNLGYVLTYSPAPSPSPSLRVWDIEQAIGRLCVTLGVRAGYVNSLVANDRHVSISSNDNNINLLDFGVQDP 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02850 474 PANTHER TRANSCRIPTIONAL REGULATOR STERILE APETALA 8 472 - -
Gma02g02850 474 SUPERFAMILY F-box domain 80 134 IPR036047 GO:0005515
Gma02g02850 474 Gene3D - 137 473 IPR015943 GO:0005515
Gma02g02850 474 PANTHER WD40 REPEAT PROTEIN 12, 37 8 472 - -
Gma02g02850 474 MobiDBLite consensus disorder prediction 1 22 - -
Gma02g02850 474 MobiDBLite consensus disorder prediction 1 54 - -
Gma02g02850 474 Gene3D - 41 136 - -
Gma02g02850 474 SUPERFAMILY WD40 repeat-like 161 466 IPR036322 GO:0005515
Gma02g02850 474 MobiDBLite consensus disorder prediction 34 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02850 Gma-Chr2 53959496 53964051 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Gma02g02850 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02850 - - gmx:100781108 902.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00088 14 725690 730349 Gma02g02850 02 53959496 53964051 GST