Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02834 ATGGGTACTAAATCGGCTGTTGACTTAATGGAGTCTTTATCTGAGGTTCATTTTTCTGGATTTCACATTGATGGCTTAGAGCAAAGAAAGGCTGGCACAGAGCAACCAACCACTTCAACAACTGACATGTATAAACAACCTTTTGTGATAGGTGTTGCTGGTGGAGCAGCATCCGGTAAGACATCAGTTTGTGATATGATTGTTCAGCAGCTTCATGATCAACGAGTCGTACTTGTTAATCAGGACTCTTTTTACCATAATTTGACTCAGGAGGAACTTACAAGAGTACAAGATTACAACTTTGACCTTCCTGAAGCTTTTGATACTGAGCAATTGCTACGTGTCATGGACAAGTTGAAGCGTGGCCAAGCAGTAGATATTCCAAACTATGACTTTAAGGGTTACAAGAATGATGTTTTTCCAGCAAGACGGGTAAACCCAGCGGATGTTATTATTTTGGAAGGTATCCTTGTTTTTCATGATCCACGAGTGCGAGCATTGATGAATATGAAGATATTTGTTGACACAGATGCTGATGTTCGTCTGGCTAGAAGAATTAAGCGTGATACTGCTGACAATGCTCGTGATATTGGAGCTGTGCTTGATCAGTATTCTAAATTTGTGAAGCCGGCTTTTGATGACTTTATTCTTCCCACCAAGAAGTATGCTGATATCATTATACCCCGTGGAAGAGATAATCATGTGGCTATTGATTTGATTGTACAACATATTCGCACGAAGCTTGGTCAGCATGACATGTGTAAAATATATCGTAACTTATATGTCATTCAGTCTACTTTTCAGATACGGGGTATGCATACCCTGATACGTGATTCTCAAACAACGAAACATGACTTTGTATTTTATTCTGACCGTTTGATTCGTTTGGTTGTAGAACATGGCCTAGGGCATCTTCCATTTACAGAAAAGCAAGTAACCACTCCAACTGCATCGGTATACAGTGGTGTGGATTTCTGCAAGAGGTTGTGTGGTGTCTCTATCATCCGGAGtggggagagtatggaaaatgctctacgagcatgctgcaaaggtatcaagattgggaaaattcttattcatagagaaggTGACAATGGTCAACAGCAGCTAATATATGAGAAGTTGCCTAATGACATCTCAGATAGGCATGTATTACTGTTGGATCCCATCTTAGGCACAGGTAATTCGGCAGTTGAAGCAATTTCTTTGCTTTTAAAGAAGGGTGTACCAGAGTCCAACATTTTATTTCTCAATCTCGTATCAGCACCTCAAGGTGTTCATGTGGTCTGTAAAAGATTTCCGAGAATAAAAATCGTGACATCTGAGATTGAGATTGGTTTGAATGAAGCATTCCGTGTCATACCTGGCATGGGTGAGTTTGGGGACCGGTACTTTGGAACAGACGATGATGACCAGCAAGCTTCACAGTAG 1431 0.3857 MGTKSAVDLMESLSEVHFSGFHIDGLEQRKAGTEQPTTSTTDMYKQPFVIGVAGGAASGKTSVCDMIVQQLHDQRVVLVNQDSFYHNLTQEELTRVQDYNFDLPEAFDTEQLLRVMDKLKRGQAVDIPNYDFKGYKNDVFPARRVNPADVIILEGILVFHDPRVRALMNMKIFVDTDADVRLARRIKRDTADNARDIGAVLDQYSKFVKPAFDDFILPTKKYADIIIPRGRDNHVAIDLIVQHIRTKLGQHDMCKIYRNLYVIQSTFQIRGMHTLIRDSQTTKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVTTPTASVYSGVDFCKRLCGVSIIRSGESMENALRACCKGIKIGKILIHREGDNGQQQLIYEKLPNDISDRHVLLLDPILGTGNSAVEAISLLLKKGVPESNILFLNLVSAPQGVHVVCKRFPRIKIVTSEIEIGLNEAFRVIPGMGEFGDRYFGTDDDDQQASQ 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02834 476 CDD UMPK 49 247 IPR000764 -
Gma02g02834 476 CDD PRTases_typeI 324 440 IPR000836 -
Gma02g02834 476 Gene3D - 43 250 IPR027417 -
Gma02g02834 476 PRINTS Uridine kinase signature 122 137 - -
Gma02g02834 476 PRINTS Uridine kinase signature 193 204 - -
Gma02g02834 476 PRINTS Uridine kinase signature 215 228 - -
Gma02g02834 476 PRINTS Uridine kinase signature 47 64 - -
Gma02g02834 476 PRINTS Uridine kinase signature 179 189 - -
Gma02g02834 476 PRINTS Uridine kinase signature 77 88 - -
Gma02g02834 476 TIGRFAM udk: uridine kinase 46 247 IPR000764 -
Gma02g02834 476 PANTHER URIDINE KINASE 15 468 - -
Gma02g02834 476 PANTHER URIDINE KINASE 15 468 - -
Gma02g02834 476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 240 IPR027417 -
Gma02g02834 476 Gene3D - 251 467 IPR029057 -
Gma02g02834 476 SUPERFAMILY PRTase-like 250 468 IPR029057 -
Gma02g02834 476 Pfam Phosphoribulokinase / Uridine kinase family 49 235 IPR006083 GO:0005524|GO:0016301
Gma02g02834 476 Pfam Uracil phosphoribosyltransferase 265 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02834 Gma-Chr2 53833066 53839913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02834 1 470 PRT Gene Family AT4G26510 82.203 0.0 804
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02834 K00876 - gmx:100777904 937.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00105 14 858693 865796 Gma02g02834 02 53833066 53839913 GST
Gma18g00681 18 6935377 6941589 Gma02g02834 02 53833066 53839913 PCT
Gma08g03094 08 47642421 47649708 Gma02g02834 02 53833066 53839913 PCT
Gma02g02834 02 53833066 53839913 Gma18g00681 18 6935377 6941589 PCT
Gma02g02834 02 53833066 53839913 Gma08g03094 08 47642421 47649708 PCT