Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02810 ATGGCTGAGTCGGACAACGACTCGGGAGGGGCGCAGAACGCGGGAAACAGTGGAAACTTGAGCGAGTTGTCGCCTCGGGAACAGGACCGGTTTCTCCCCATAGCGAACGTGAGCAGGATCATGAAGAAGGCCTTGCCGGCGAACGCGAAGATCTCGAAGGACGCGAAGGAGACGGTGCAGGAATGCGTGTCGGAGTTCATCAGCTTCATAACGGGTGAGGCGTCGGACAAGTGCCAGAGGGAGAAGCGCAAGACCATCAACGGCGACGATCTTCTCTGGGCCATGACAACCCTGGGATTCGAAGAGTACGTGGAGCCTCTGAAGATTTACCTCCAGCGCTTCCGCGAGATGGAGGGAGAGAAGACCGTGGCCGCCCGCGACTCTTCTAAGGACTCGGCCTCCGCCTCCTCCTATCATCAGGGACACGTGTACGGCTCCCCTGCCTACCATCATCAAGTGCCTGGGCCCACTTATCCTGCCCCTGGTAGACCCAGATGA 498 0.5924 MAESDNDSGGAQNAGNSGNLSELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQRFREMEGEKTVAARDSSKDSASASSYHQGHVYGSPAYHHQVPGPTYPAPGRPR 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02810 165 MobiDBLite consensus disorder prediction 1 24 - -
Gma02g02810 165 MobiDBLite consensus disorder prediction 122 165 - -
Gma02g02810 165 PRINTS CCAAT-binding transcription factor subunit A signature 59 77 - -
Gma02g02810 165 PRINTS CCAAT-binding transcription factor subunit A signature 78 96 - -
Gma02g02810 165 PRINTS CCAAT-binding transcription factor subunit A signature 97 115 - -
Gma02g02810 165 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 31 95 IPR003958 -
Gma02g02810 165 Gene3D Histone, subunit A 19 142 IPR009072 GO:0046982
Gma02g02810 165 MobiDBLite consensus disorder prediction 1 27 - -
Gma02g02810 165 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 141 IPR027113 GO:0001228|GO:0006355|GO:0016602
Gma02g02810 165 SUPERFAMILY Histone-fold 28 136 IPR009072 GO:0046982
Gma02g02810 165 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2 1 141 - -
Gma02g02810 165 ProSitePatterns NF-YB/HAP3 subunit signature. 62 78 IPR003956 GO:0005634|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02810 Gma-Chr2 53664237 53665210 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02810 1 125 CCAAT-HAP3 Transcription Factor Family AT4G14540 84.000 5.41e-75 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Gma02g02810 CBFD_NFYB_HMF 1.2e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02810 K08065 - gmx:100500556 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02810 02 53664237 53665210 Gma02g02810 02 53664237 53665210 ECH