Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02805 ATGGCCAACAATGGTGCAAAGGATCCCTTGCTGTCAGGATCACTTGATGCGACTCAAAAGACTAAACAGCAGTTATTAAACAAGAGAAGGCTCCTCCGTTCTAGAAGTGCTCCTCACGCAGAGCTTGTTCCTACAGAGACAAATTGCAATGAATCAATTCCTCGTACTGCATCCATATTTCAGAATTTGCATCCAAGTTTTAAAAGAATGGCTATCTACCTTGCAGTCTATTTAGGTGTAGGTGCTTTAATCTTCTACCTTGTCAGAAACCAGATTAAGGGGCAGAAAACAGATGGAATTCTTGATGCTTTATACTTCACAATTGTGACAATGACCACTGTTGGATATGGAGACCTTGTGCCAAATAGCCACCTTGCAAAACTACTTGCATGTGCTTTTGTTTTCTCTGGGATGGCATTGATTGGACTAATTGTAAGCAAAGCAGCAGACTACTTAGTTGAGAAACAAGAACTTTTGCTAGTTAAAGCCATGCGCATGCACCAAAAAATTGGTTCAACTGAAATTTTAAGGGAGGTTGAGACCAATAAAACAAGATACAAATTATTTCTAGTCTTTTCCCTTCTTTTGATTCTCATCATCGTGGGGACAATTTTTTTGGTCACAGTTGAGAAATTGGATGTTATAGATGCATTCTACTGTGTTTGTTCTACAATTACAACACTGGGTTATGGGGATCAAAGTTTCTCAACTCAAGCAGGAAGAATATTTGCTGTGTTTTGGATATTGACAGGTACTATTACTTTAGCTCAGCTTTTCGTCTACATTGCTGAACTAAACACTGAAATCAGACAAAAGGAACTTGTCAAGTGGGTACTTACAAGGAAAGTGACCAATTTAGATTTGGAGGCTGCAGATCTTGATGAGGATGGGACTGTTGGGGCTGCGGAATTCgttatttataagctcaaagagatggggaagattagtcaagaagatatatcactTGTGATGCAGGAGTTTGAACAGCTTGATGTTGATGATTCTGGCACACTATCAACTTCGGATATAACACTTGCTCAGTCATCTTAG 1050 0.3762 MANNGAKDPLLSGSLDATQKTKQQLLNKRRLLRSRSAPHAELVPTETNCNESIPRTASIFQNLHPSFKRMAIYLAVYLGVGALIFYLVRNQIKGQKTDGILDALYFTIVTMTTVGYGDLVPNSHLAKLLACAFVFSGMALIGLIVSKAADYLVEKQELLLVKAMRMHQKIGSTEILREVETNKTRYKLFLVFSLLLILIIVGTIFLVTVEKLDVIDAFYCVCSTITTLGYGDQSFSTQAGRIFAVFWILTGTITLAQLFVYIAELNTEIRQKELVKWVLTRKVTNLDLEAADLDEDGTVGAAEFVIYKLKEMGKISQEDISLVMQEFEQLDVDDSGTLSTSDITLAQSS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02805 349 Coils Coil 15 35 - -
Gma02g02805 349 SUPERFAMILY Voltage-gated potassium channels 64 169 - -
Gma02g02805 349 PANTHER TWO PORE POTASSIUM CHANNEL A 21 344 - -
Gma02g02805 349 SUPERFAMILY EF-hand 251 345 IPR011992 -
Gma02g02805 349 PRINTS Two pore domain K+ channel signature 223 251 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gma02g02805 349 PRINTS Two pore domain K+ channel signature 297 306 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gma02g02805 349 ProSitePatterns EF-hand calcium-binding domain. 331 343 IPR018247 -
Gma02g02805 349 ProSitePatterns EF-hand calcium-binding domain. 292 304 IPR018247 -
Gma02g02805 349 SUPERFAMILY Voltage-gated potassium channels 159 285 - -
Gma02g02805 349 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 21 344 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gma02g02805 349 Pfam Ion channel 194 265 IPR013099 -
Gma02g02805 349 Pfam Ion channel 73 153 IPR013099 -
Gma02g02805 349 Gene3D - 168 278 - -
Gma02g02805 349 Gene3D - 64 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02805 Gma-Chr2 53643325 53646406 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02805 54 349 Ion Channels AT5G55630 66.554 1.60e-150 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02805 K05389 - gmx:100777388 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02805 02 53643325 53646406 Gma02g02805 02 53643325 53646406 ECH
Gma14g00130 14 1064461 1067482 Gma02g02805 02 53643325 53646406 GST