Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02800 ATGAGGTTATTATCAGCTTTGGTTTCTTTGGTTTTGTTGTTGATGAAGTGTGTTCAGGTGCAAGGTGACACTGATAGTGATCATGCTAGAAACTTCATTACGTGGGAAGACTTCATGGTTGATGAACAAGGTATAACATCCAATGTTGGTGGTCGAATTATTGTGGTCGACCAAACTGGTAACGGAGATTCAACGACTGTTCAAGGGGCTGTAGATATGGTTCCCCAAAACAACACAGAAAGGGTCAAGATATACATTTATCCTGGAATTTATAGAGAAAGAGTGCATGTGCCGAAAAGCAAGCCGTTTATTTCATTTATAGGTAAACCTAATATAACAATGAATGCGAGAGGGGCAAATATAACGGCGAACGCGAAAGCACTAAAGAATAATATAACGGCGAATGCGAACGCACTAAATATAACGGAGATAGCGAATGCCATACCCATCATCACAAATAGTACTAAGGCATCAGACAAAGGCTCAGATGGCCAAGAAATGGGCACGGTTAGTACAGCAACTGTATGGGTAGAATCTGATTTCTTCTGCGCAACTGCTCTTACAATTGAGAATTTGGTAGATAAAGATGCAGATAAACGTCAAGCAGTAGCATTGCGTGTAGACGGTGATAAAGCTGTATTTTATCGAGTTAAGCTTGTGGGGGAGCAGGACACTCTCTTGGATAGCACAGGAATCCATTATTTCTACCGAAGTTACATTCAAGGATCCGTTGATTTTATATGTGGCAACGCAAAATCATTGTTCCATGAGTGTGTACTAGACTCTGTAGCTGAGTTTTGGGGAGCAATTGCAGCTCATCACAGGGATTCAGAAGATGAAGATACAGGGTTTTCGTTTGTTAATTGCACAATCAAAGGAAGTGGTAGTGTTTTTCTTGGTAGAGCATGGGGCAAGTATGCAACAACAACATATTCCTACTGTCACATGGATGATGTTATTTTTCCTTTGGGATGGAGCGATTGGGGTGATCCATCTAGACAAGGGACTGCGATGTTTGGGGAGTATGAATGTTCAGGAAAAGGATCAAATAGAACTGAGAGAGTGGAATGGTCAAAAGCTTTAAGCAGTGAGGAAGCTATGCCTTTCCTGAGCAGAGACTATATATATGGAGATGGATGGCTTAGACTATAA 1152 0.4115 MRLLSALVSLVLLLMKCVQVQGDTDSDHARNFITWEDFMVDEQGITSNVGGRIIVVDQTGNGDSTTVQGAVDMVPQNNTERVKIYIYPGIYRERVHVPKSKPFISFIGKPNITMNARGANITANAKALKNNITANANALNITEIANAIPIITNSTKASDKGSDGQEMGTVSTATVWVESDFFCATALTIENLVDKDADKRQAVALRVDGDKAVFYRVKLVGEQDTLLDSTGIHYFYRSYIQGSVDFICGNAKSLFHECVLDSVAEFWGAIAAHHRDSEDEDTGFSFVNCTIKGSGSVFLGRAWGKYATTTYSYCHMDDVIFPLGWSDWGDPSRQGTAMFGEYECSGKGSNRTERVEWSKALSSEEAMPFLSRDYIYGDGWLRL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02800 383 Gene3D - 52 383 IPR012334 -
Gma02g02800 383 Pfam Pectinesterase 54 115 IPR000070 GO:0030599|GO:0042545
Gma02g02800 383 Pfam Pectinesterase 153 378 IPR000070 GO:0030599|GO:0042545
Gma02g02800 383 SUPERFAMILY Pectin lyase-like 51 381 IPR011050 -
Gma02g02800 383 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 11 129 - -
Gma02g02800 383 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 131 383 - -
Gma02g02800 383 PANTHER PECTINESTERASE QRT1 131 383 - -
Gma02g02800 383 PANTHER PECTINESTERASE QRT1 11 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02800 Gma-Chr2 53614265 53617214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02800 4 334 Carbohydrate Esterase AT5G55590 49.448 4.26e-112 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02800 K01051 - gmx:100812850 732.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02800 02 53614265 53617214 Gma02g02800 02 53614265 53617214 ECH
Gma14g00134 14 1089551 1093601 Gma02g02800 02 53614265 53617214 GST