Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02792 ATGGCTGCTATTCTGCCTCTCTATCCTTATAATCCATTGCTATACTTTTCGACTCCTTCGAGTTTTCGTTCTCAATTTTGGATTTTGGAGAGAGGGCGTTTGGGTTCTGCAAGTTTGAAGAATTTGGTGAAACTTGCAGCACATTCCAATCCGAGGATTCTCAAGAGCAACAGGAAGTCAAAGTATGGAGAGGCACTGTTGTTCTACGACAGCGACGAAGAAATGGACGACGACGTCAGCAACGACGACGATGATGATGATTGGCTTTCTGATGAGGAATTTTCTGAGCCTGCTAACTTAGATGTTAATAACAAGAGATTTAAGTCAAAGACAACTAAAGGAAAAGATAGACAACAGGAATGGGAGTGGGGTTTGAGATCTTTTGACAACAAACAAAGCATTAGATTGCCTAGGAGTGAGAGAGTGGCATCGTTACAACGAAATGAGAGTGGAAAGTTGCAGCATAGTAGAAATGTAAAGGATAAAAAATATCCCCGGTTATCCGAAGAGATTCCTTTGGATGTGAAATGGTTACCACTTCTTGATTACTTGAGCACTTTTGGAATGAAAGAATCACACTTTGTCCAAATGTATGAGAGACGCATGCAATCACTTCAAATTAATGTGTGTTCCGCACAGGAAAGGTTGGAATACTTATTGAGTGTTGGTGTTAAACAAAGTGATGTAAGAAGAATCCTTTTGAGGCAGCCACAAATTCTTGAGTATACAGTGGAGAACAATTTGAAGTCTCGTGTTGCTTTCTTGAGGGGTCTGGGCATACCTAATTCTAGAATAGGGCAAATCATTGCTGCTGCTCCATCCTTGTTTTCTTATAGTGTTGAGAATTCGTTAAAACCAACAGTTAGATATTTAATTGAGGAAGTTGGCATCAAGGAGAAAGATTTGGGTAAGGTCATTCAGCTTAGTCCCCAAATTCTTGTGCAGAGAATTGACATTTCATGGAATACTCGTTGTATGTTTCTTACCAAAGAGTTGGGTGCACCCAGAGATAGCATTGTGAAGATGGTGACAAAACATCCCCAACTTCTCCATTACAGCATAGATGATGGATTACTTCCAAGAATAAATTTCCTAAGGAGCATAGGAATGAAAAATTCAGACATCGTGAAAGTTTTGACAAGCCTAACACAGGTGCTTTCTCTGTCCTTGGAGGAGAATCTAAAGCCCAAATATTTGTACTTGGTTAATGAACTTAACAATGAAGTGCAATCCTTGACCAAATACCCGATGTATCTTAGCTTATCTTTAGACCAGAGAATTCGTCCTCGTCATAGAACACATCATGGTGCAGTTTGTCACCCTAAGGTTGTGGACAATATTGCAAACTTTAATTGGTATAAATTGAAGCTGTATCAACTTTAA 1383 0.3941 MAAILPLYPYNPLLYFSTPSSFRSQFWILERGRLGSASLKNLVKLAAHSNPRILKSNRKSKYGEALLFYDSDEEMDDDVSNDDDDDDWLSDEEFSEPANLDVNNKRFKSKTTKGKDRQQEWEWGLRSFDNKQSIRLPRSERVASLQRNESGKLQHSRNVKDKKYPRLSEEIPLDVKWLPLLDYLSTFGMKESHFVQMYERRMQSLQINVCSAQERLEYLLSVGVKQSDVRRILLRQPQILEYTVENNLKSRVAFLRGLGIPNSRIGQIIAAAPSLFSYSVENSLKPTVRYLIEEVGIKEKDLGKVIQLSPQILVQRIDISWNTRCMFLTKELGAPRDSIVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMKNSDIVKVLTSLTQVLSLSLEENLKPKYLYLVNELNNEVQSLTKYPMYLSLSLDQRIRPRHRTHHGAVCHPKVVDNIANFNWYKLKLYQL 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02792 460 Pfam mTERF 244 433 IPR003690 GO:0003690|GO:0006355
Gma02g02792 460 Pfam mTERF 182 254 IPR003690 GO:0003690|GO:0006355
Gma02g02792 460 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF9, CHLOROPLASTIC 34 433 - -
Gma02g02792 460 PANTHER CGI-12 PROTEIN-RELATED 34 433 IPR003690 GO:0003690|GO:0006355
Gma02g02792 460 Gene3D Transcription termination factor 3, mitochondrial 241 443 IPR038538 -
Gma02g02792 460 SMART mt_12 409 440 IPR003690 GO:0003690|GO:0006355
Gma02g02792 460 SMART mt_12 266 298 IPR003690 GO:0003690|GO:0006355
Gma02g02792 460 SMART mt_12 376 408 IPR003690 GO:0003690|GO:0006355
Gma02g02792 460 SMART mt_12 340 371 IPR003690 GO:0003690|GO:0006355
Gma02g02792 460 SMART mt_12 303 335 IPR003690 GO:0003690|GO:0006355
Gma02g02792 460 SMART mt_12 230 261 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02792 Gma-Chr2 53518962 53521478 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma02g02792 mTERF 1.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02792 K15032 - gmx:100809638 774.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02792 02 53518962 53521478 Gma02g02792 02 53518962 53521478 ECH
Gma14g00144 14 1172530 1175356 Gma02g02792 02 53518962 53521478 GST