Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02790 ATGCAAATGTCTCAGAAACATAAAATGTCCTATGACTCTAGCAGGTTCACCAGTGAGCCTGTGCAAAATCTGGGGTCATGTTGCTTCCTGCAAAGTGGGAACCTAGACTACTACTCATCCTCTGATAACAGTAGCCATGCAACCTACCCTTCTGTTTGTACTTTCGAACAATATTGCACCCTTGAATCTTCTACAAACAACAATTTACCTTCCCTAAATTCTTCATCTACTGTCAGTTTCTCACCTAACAATAGCCCAGTCTCAAAGCTGCAATCAAAATCAAACGTATTGAGTTCGCAGAATTCTCTTGAACTTGTTAATGATTCGCTAGAAAACGAATCTTGTTTGACACTTAACAATGACGAGCTGAGGCACAAGATAAGAGAGCTTGAAAGTGCTTTGTTGGGACATGATACATATATTCTGGATACTTATGATACCATAATTCCAGAAGAATCTGATTCATTTATGTTAGAGGCAGAAAGATGGAAGAGAATGATGGAAATGATATCTAGAGGGGATTTGAAAGAGATGCTCTGTACATGTGCAAAAACAGTGGCAGGAAATGATATGGAGACAACTGAATGGTTGATGTCGGAGTTGCGTAAAATGGTCTCCGTGTCTGGCGATCCAATCCAACGACTGGGAGCATACATGTTGGAGGCTCTTGTTGCAAGGCTGGCCTCTTCAGGAAGCACAATCTACAAAGTCTTGAAATGTAAAGAGCCTACTGGTAGTGAACTCCTTTCACACATGCATCTACTTTATGAAATCTGTCCATATCTCAAATTTGGGTACATGTCCGCAAATGGAGCTATTGCTGAAGCCATGAAGGAGGAAAGTGAAGTCCACATTATTGATTTTCAGATTAACCAGGGAATTCAGTGGGTAAGCCTAATCCAAGCTCTTGCTGGCAGACCTGGAGGACCCCCCAAGATTAGAATAACAGGTTTTGATGACTCCACTTCAGCTTATGCCAGGGAAGGGGGCCTTGAAATTGTTGGAGCGAGGTTATCAACGCTTGCACAATCATATAATGTACCCTTTGAGTTCCATGCTATACGAGCTTCTCCCACTGAGGTTGAACTCAAAGACCTTGCACTTCAACCTGGTGAAGCTATTGCTGTGAACTTTGCCATGATGTTGCACCATGTTCCAGATGAAAGTGTGGATAGTGGGAACCATCGTGACCGGTTGGTGAGATTGGCAAAGTGCTTGTCTCCTAAGATTGTGACACTAGTTGAGCAAGAATCACATACCAACAACCTCCCATTCTTCCCCCGTTTCGTTGAGACGATGAACTACTACTTGGCTATTTTTGAATCAATTGATGTTGCTCTGCCGAGGGAGCACAAAGAAAGGATTAATGTGGAGCAGCATTGTTTGGCTCGAGAAGTTGTCAACTTAATAGCATGTGAAGGGGAGGAAAGAGTGGAACGTCACGAGCTTCTGAAGAAGTGGAGATCGCGTTTTACTATGGCTGGATTCGCACCATATCCACTGAACTCGTTTATTACTTGTTCAATAAAAAATCTTCAGCGAAGCTACCGAGGACATTACACTCTAGAGGAGAGAGATGGGGCTCTGTGTCTTGGTTGGATGAATCAAGTTCTTATTACCTCTTGTGCTTGGAGGTGA 1638 0.4292 MQMSQKHKMSYDSSRFTSEPVQNLGSCCFLQSGNLDYYSSSDNSSHATYPSVCTFEQYCTLESSTNNNLPSLNSSSTVSFSPNNSPVSKLQSKSNVLSSQNSLELVNDSLENESCLTLNNDELRHKIRELESALLGHDTYILDTYDTIIPEESDSFMLEAERWKRMMEMISRGDLKEMLCTCAKTVAGNDMETTEWLMSELRKMVSVSGDPIQRLGAYMLEALVARLASSGSTIYKVLKCKEPTGSELLSHMHLLYEICPYLKFGYMSANGAIAEAMKEESEVHIIDFQINQGIQWVSLIQALAGRPGGPPKIRITGFDDSTSAYAREGGLEIVGARLSTLAQSYNVPFEFHAIRASPTEVELKDLALQPGEAIAVNFAMMLHHVPDESVDSGNHRDRLVRLAKCLSPKIVTLVEQESHTNNLPFFPRFVETMNYYLAIFESIDVALPREHKERINVEQHCLAREVVNLIACEGEERVERHELLKKWRSRFTMAGFAPYPLNSFITCSIKNLQRSYRGHYTLEERDGALCLGWMNQVLITSCAWR 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02790 545 ProSiteProfiles GRAS family profile. 166 545 IPR005202 -
Gma02g02790 545 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 17 544 IPR005202 -
Gma02g02790 545 Pfam GRAS domain family 176 545 IPR005202 -
Gma02g02790 545 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 17 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02790 Gma-Chr2 53507681 53512092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02790 1 545 GRAS Transcription Factor Family AT1G50600 56.443 0.0 591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma02g02790 GRAS 5.1e-131 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02790 - - gmx:100817120 1050.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02790 02 53507681 53512092 Gma02g02790 02 53507681 53512092 ECH
Gma14g00146 14 1181430 1184966 Gma02g02790 02 53507681 53512092 GST
Gma18g00741 18 7877772 7881678 Gma02g02790 02 53507681 53512092 PCT
Gma08g03038 08 46969657 46971294 Gma02g02790 02 53507681 53512092 PCT
Gma02g02790 02 53507681 53512092 Gma18g00741 18 7877772 7881678 PCT
Gma02g02790 02 53507681 53512092 Gma08g03038 08 46969657 46971294 PCT