Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02789 ATGGACGCCGCCGCCACCAACTCCGGCGAACCCCGCCCGAGCTCGGAGCTTCAGACAACTGGGGAATCCGAGGATCCGAATCGAAGCGGGTTGGGACAGAATTCGACGGCGAGGTACAAGCTGATGTCGCCGGCGAAGCTTCCGATCTCGAGGTCGCCGTGCATCACGATTCCTCCGGGGCTCAGTCCGACGTCGTTTCTGGAATCCCCTGTTCTTCTTTCCAACATGAAGGTGGAGGCTTCACCAACTACAGGGTCCCTCCGTAAGCTCCAACAAACAGTACATGGTTCTATGGCTTCTGCTGCCTCTGCTACATTTCCAGTAACCACTGCCTGCTTCAATACCAATACTGTTGATGCCAGAAAATCAAGTTTCTTTGAGTTCAAACCACTCAATAGATCGAATAAGGTTCCTGCAGACTTCAACAATCATGTAAGTAAACAGTCTACTCAAGTAGAAGGTCCAGGAAAAGCTCAATCATTTGCTTCCTCACCATTAGTTGAAAGTGAGATAACAGTTCCTTCTAATGAATTAAGCCTATCATCACCTGTACAAATGGTTAGTTCTAGTGCTAGTGCTCCTGTTGATGTTGATTTGGATGAAATTAACCACAAATGCAACACAGCTACTGGGCTTCAAGCATCACATGTTGAGGTTAGAGGCAGTGGACTTTCTGTTGCAGCTGAGAAAACATCTGATGATGGATACAATTGGCGAAAATATGGGCAAAAGCTTGTTAAAGGAAGTGAATTTCCTCGCAGTTATTACAAATGTACACATCCTAACTGTGAGGTGAAAAAACTTTTTGAACGTTCTCATGATGGTCAAATCACTGAGATAGTTTACAAGGGAACACATGATCATCCTAAACCTCAATCAAGCTGCCGATACTCTACTGGTACTGTTATGTATATTCAAGGAGAGAGATCTGATAAGGCTTCTTTGGCTGGCCGAGATGACAAAGCATCCACTATGTATGGTCAGGTGTCTCATGCTGCTGAGCCCAACAGTACTCCAGAGTCATCACCTGTAGCCACAAATGATGATGGTTTAGAGGGTGCTGGGTTTGTGTCAAACAGGAATAATGAAGAGGTTGATGATGACGATCCCTTCTCAAAGCGAAGCAGAAAAATGGAACTTGGAAATGTTGACATCACTCCAGTAGTTAAGCCTATCCGGGAACCACGTGTTGTTGTACAAACTTTGAGTGAGGTTGACATATTGGATGATGGGTACCGCTGGCGTAAGTATGGCCAAAAGGTGGTGAGAGGCAATCCTAACCCAAGGAGCTATTACAAATGCACAAATGCTGGTTGCCCTGTCCGAAAACACGTGGAGAGAGCATCTCATGATCCGAAAGCAGTGATAACCACATACGAGGGTAAACACAATCATGATGTACCTGCTGCAAGGAATAGCAGCCATGACATGGCAGTACCAGCAGCTACAGCAGGTGGACAGACAAGAATTAAGTTAGAAGAAAGTGATACCATTAGCCTTGACCTTGGAATGGGAATTAGCTCAGCTGCTGAACATAGATCAAATGGGCAAGGGAAAATGCTGCATTCAGAGTTGGGGGAGACACAAACTCACGCCAGCAATTCCAACTTCAAGTTTGTTCATACTACCTCAGCTCCAGTATACTTTGGTGTTCTAAATAACAGCTCAAATCCCTATGGTTCTAGAGACAATAGGAGTGATGGCCCATCTTTAAACCATTCCTCATATCCATGCCCACAGAGCATGGGAAGAATACTATTGGGTCCATGA 1770 0.4548 MDAAATNSGEPRPSSELQTTGESEDPNRSGLGQNSTARYKLMSPAKLPISRSPCITIPPGLSPTSFLESPVLLSNMKVEASPTTGSLRKLQQTVHGSMASAASATFPVTTACFNTNTVDARKSSFFEFKPLNRSNKVPADFNNHVSKQSTQVEGPGKAQSFASSPLVESEITVPSNELSLSSPVQMVSSSASAPVDVDLDEINHKCNTATGLQASHVEVRGSGLSVAAEKTSDDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIVYKGTHDHPKPQSSCRYSTGTVMYIQGERSDKASLAGRDDKASTMYGQVSHAAEPNSTPESSPVATNDDGLEGAGFVSNRNNEEVDDDDPFSKRSRKMELGNVDITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPAARNSSHDMAVPAATAGGQTRIKLEESDTISLDLGMGISSAAEHRSNGQGKMLHSELGETQTHASNSNFKFVHTTSAPVYFGVLNNSSNPYGSRDNRSDGPSLNHSSYPCPQSMGRILLGP 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02789 589 MobiDBLite consensus disorder prediction 1 35 - -
Gma02g02789 589 Pfam WRKY DNA -binding domain 409 465 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma02g02789 589 Pfam WRKY DNA -binding domain 233 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma02g02789 589 Gene3D WRKY domain 224 292 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma02g02789 589 Gene3D WRKY domain 393 469 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma02g02789 589 SUPERFAMILY WRKY DNA-binding domain 400 468 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma02g02789 589 MobiDBLite consensus disorder prediction 329 345 - -
Gma02g02789 589 ProSiteProfiles WRKY domain profile. 227 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma02g02789 589 SUPERFAMILY WRKY DNA-binding domain 229 291 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma02g02789 589 ProSiteProfiles WRKY domain profile. 403 468 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma02g02789 589 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 32 569 IPR044810 GO:0003700
Gma02g02789 589 MobiDBLite consensus disorder prediction 329 376 - -
Gma02g02789 589 MobiDBLite consensus disorder prediction 361 376 - -
Gma02g02789 589 MobiDBLite consensus disorder prediction 558 589 - -
Gma02g02789 589 MobiDBLite consensus disorder prediction 558 579 - -
Gma02g02789 589 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 32 569 - -
Gma02g02789 589 SMART WRKY_cls 408 467 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma02g02789 589 SMART WRKY_cls 232 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02789 Gma-Chr2 53493181 53498538 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02789 42 589 WRKY Transcription Factor Family AT4G26640 55.935 0.0 527
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma02g02789 WRKY 1.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02789 - - gmx:100816583 1166.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02789 02 53493181 53498538 Gma02g02789 02 53493181 53498538 ECH
Gma14g00148 14 1188585 1194130 Gma02g02789 02 53493181 53498538 GST
Gma18g00742 18 7883446 7888755 Gma02g02789 02 53493181 53498538 PCT
Gma08g03037 08 46958315 46964293 Gma02g02789 02 53493181 53498538 PCT
Gma02g02789 02 53493181 53498538 Gma18g00742 18 7883446 7888755 PCT
Gma02g02789 02 53493181 53498538 Gma08g03037 08 46958315 46964293 PCT