Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02787 ATGATGCCAAGTGTTAACCCTGACAAAGATTCCGAGCCATTTGTTGAGACCGATCCAACCGGTCGCTATGGTAGATACAGTGAGTTGCTCGGATGTGGTGCTGTGAAGAAAGTGTACCGTGCATTTGATCAAGAAGAAGGAATAGAGGTGGCATGGAACCAGGTTAAGCTGAGGAACTTCTGTGATGACCCTGCCATGTTGGATAGGCTTTACTCTGAAGTGAGGTTGCTCAGAAGCTTGACCAACAAGAACATCATTGCACTTTACAATGTGTGGAGGGATGAGCAGAGAAACACTTTGAATTTCATCACTGAGGTTTGCACCAGTGGGAATTTGAGGGAGTACAGGAAGAAGCACAGACATGTTTCCATAAAGGCCCTAAAGAAGTGGTCTAAGCAGATTTTGAAAGGGTTGAATTATTTGCACTTGCACGATCCCTGCATCATCCACAGAGATCTCAATTGCAGCAATGTGTTTGTCAATGGGAATACTGGCCAGGTTAAGATTGGTGACTTGGGTTTGGCAGCAATTGTGGGCAAGAACCATTGTGCACACACGATTCTTGGCACACCAGAATTTATGGCTCCAGAGTTATACGATGAAGACTACACAGAATTGGTGGACATATACTCATTTGGGATGTGTGTGTTAGAGATGGTGACAGTAGAGATTCCTTATAGTGAATGTGACAATGTTGCTAAGATATACAAGAAGGTGTCTTCTGGAGTTAGACCTGCTGCCTTGAACAAGGTCAAAGatcctgaggttaaggctttcattgagaagtgccttgctcagccaagggctaggccttctgcagctgagcttctaagagatcctttcttTGATGAGATTGTTGATGATGATGACGAAAATGATGACTGTTCTTGTTCATATCAATAG 903 0.392 MMPSVNPDKDSEPFVETDPTGRYGRYSELLGCGAVKKVYRAFDQEEGIEVAWNQVKLRNFCDDPAMLDRLYSEVRLLRSLTNKNIIALYNVWRDEQRNTLNFITEVCTSGNLREYRKKHRHVSIKALKKWSKQILKGLNYLHLHDPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAIVGKNHCAHTILGTPEFMAPELYDEDYTELVDIYSFGMCVLEMVTVEIPYSECDNVAKIYKKVSSGVRPAALNKVKDPEVKAFIEKCLAQPRARPSAAELLRDPFFDEIVDDDDENDDCSCSYQ 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02787 300 SUPERFAMILY Protein kinase-like (PK-like) 19 290 IPR011009 -
Gma02g02787 300 PANTHER SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN 2 300 - -
Gma02g02787 300 ProSiteProfiles Protein kinase domain profile. 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02787 300 CDD STKc_WNK 22 282 - -
Gma02g02787 300 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 300 - -
Gma02g02787 300 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Gma02g02787 300 Gene3D Transferase(Phosphotransferase) domain 1 107 288 - -
Gma02g02787 300 Pfam Protein kinase domain 27 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02787 Gma-Chr2 53476825 53479528 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02787 8 286 MAP Kinase Kinase Kinase AT5G55560 84.229 0.0 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gma02g02787 Pkinase 1.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02787 K08867 - gmx:100816060 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02787 02 53476825 53479528 Gma02g02787 02 53476825 53479528 ECH
Gma14g00150 14 1212427 1215734 Gma02g02787 02 53476825 53479528 GST
Gma18g00744 18 7918480 7920432 Gma02g02787 02 53476825 53479528 PCT
Gma08g03035 08 46933169 46935339 Gma02g02787 02 53476825 53479528 PCT
Gma02g02787 02 53476825 53479528 Gma18g00744 18 7918480 7920432 PCT
Gma02g02787 02 53476825 53479528 Gma08g03035 08 46933169 46935339 PCT