Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02761 atgaggaagggcagaggtggaggcgcctcggcggcggcggtggatgtgaacggATCCATTTTAAAGGAGCCTCGGTACCGGggcgtgaggaagagaccgtgggggagattcgccgcggagatcagagacccgttgaagaaagccagggtttggttgggaaccttcaattctgccgaggatgctgctcgtgcctacgacgccgccgctcggactctccgaggtcccaaggccaaaacaaatttcccccctctctcaCCTTTTTGCTATCCACACCCCACCACCGATCCTTTCTTCTACACTGGTTTCCACGATCAACACCACCACCACAACAACAACAACCTTAACAACCCTCAAAGACCCACTTCAAGTGGCATGAGTAGCACCGTTGAGTCCTTCAGTGGGCCCCGCCCTCCCACCACCACCACTACCACCACAACCACAACTGCGACGCCGTTTTTGACTGCTACGCGGAGATACCCGCGCACTCCCCCTCTTGTCCCTGAAGACTGCCACAGTGACTGCGACTCTTCCTCCTCCGTCGTTGACGACGGCGACGACAACATCGTTTCGTCGTCGTTTCGACCTCCCTTGCCGTTTGATCTCAACGCGCTGCCGTTTGATGATGCTGCCGCGGATGATGATCTACGCCGCACCGCGCTTTGTCTCTGA 669 0.3692 MRKGRGGGASAAAVDVNGSILKEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFNSAEDAARAYDAAARTLRGPKAKTNFPPLSPFCYPHPTTDPFFYTGFHDQHHHHNNNNLNNPQRPTSSGMSSTVESFSGPRPPTTTTTTTTTTATPFLTATRRYPRTPPLVPEDCHSDCDSSSSVVDDGDDNIVSSSFRPPLPFDLNALPFDDAAADDDLRRTALCL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02761 222 MobiDBLite consensus disorder prediction 111 146 - -
Gma02g02761 222 Pfam AP2 domain 24 74 IPR001471 GO:0003700|GO:0006355
Gma02g02761 222 MobiDBLite consensus disorder prediction 108 146 - -
Gma02g02761 222 Gene3D AP2/ERF domain 25 83 IPR036955 GO:0003700|GO:0006355
Gma02g02761 222 ProSiteProfiles AP2/ERF domain profile. 25 82 IPR001471 GO:0003700|GO:0006355
Gma02g02761 222 SMART rav1_2 25 88 IPR001471 GO:0003700|GO:0006355
Gma02g02761 222 CDD AP2 24 82 IPR001471 GO:0003700|GO:0006355
Gma02g02761 222 PANTHER ETHYLENE RESPONSE FACTOR 12 205 - -
Gma02g02761 222 MobiDBLite consensus disorder prediction 158 188 - -
Gma02g02761 222 PRINTS Ethylene responsive element binding protein signature 26 37 IPR001471 GO:0003700|GO:0006355
Gma02g02761 222 PRINTS Ethylene responsive element binding protein signature 48 64 IPR001471 GO:0003700|GO:0006355
Gma02g02761 222 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 12 205 - -
Gma02g02761 222 SUPERFAMILY DNA-binding domain 25 82 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02761 Gma-Chr2 53242850 53243518 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02761 1 222 AP2-EREBP Transcription Factor Family AT3G20310 54.472 2.43e-50 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma02g02761 AP2 3.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02761 K09286 - gmx:100803943 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02761 02 53242850 53243518 Gma02g02761 02 53242850 53243518 ECH
Gma14g00178 14 1472397 1473809 Gma02g02761 02 53242850 53243518 GST
Gma18g00792 18 8875506 8877082 Gma02g02761 02 53242850 53243518 PCT
Gma08g02999 08 46536707 46537339 Gma02g02761 02 53242850 53243518 PCT
Gma02g02761 02 53242850 53243518 Gma18g00792 18 8875506 8877082 PCT
Gma02g02761 02 53242850 53243518 Gma08g02999 08 46536707 46537339 PCT