Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma02g02755 | ATGGAACCCACTTGGAATGATGCCATTGTGAATGTTAGTAATTCTTCTGATCCAATCATGTCGTTTAGAGGGACACCGCTTGTCATGGATGAGCTTGATTTCTTTGCTCAGAAGAGAAAAGTGAGTGCAAATGATGATGATCATCAAAGAGTGGAAGACCTTCATGTTGATACTAGCTTAGATCTTCTTACGAAGAATGATACCGATGTCAATAATAGATCAACGGAGGAAGATGCGGCATTGGAAACTATGGATGATAAGAGCAACGAGTTTATAGCTTTGTTAACTGAATTGGACCAAATGAATGCTGAGAATCAACGCTTAAGAGAGTTGGTTGATCAGGTGAACAATAACTGCAACACCCTACGCATGCAACTTGTCAAGCTAACACAGAAGCATCATAGCCATGGGAATAACGGAGTGATAGGGGAAAAAGAAGATATGGTTCCAAGGTCATTTTTAGACATTGGTGTTGCTGAGAAGGATGAGCCTAATTCCCAGCAATCTTCTGAGGGAAAACTGAGAGAAAGCAAAAGCATGGTTGAGTTAGGACATGGCAAAGATATTGCTGTTTTGGAGGCATATAAGTTGGATTCTACTGCTGGAAGGGAAAGTACAAAAGCTAGAATGGAAGGGAGGCAGATAAGTACTGAACAAGAATTCTCTAACAAAGTTCCTAGATTGGATCCAGCTTCAGAAACCATGTCAATGATCAAGAAAGCTCGTGTGTCAGTTCGAGCAAAATCATATTCTTCAATGATTGCAGATGGATGCCAATGGAGAAAGTATGGGCAGAAGATGGCGAAAGGGAATCCTTGGCCAAGAGCCTATTATCGTTGCACAATGAGTACTGGTTGTCCAGTGCGGAAACAGGTACAAAGGTGTGCTGAAGACAGAAGTGTGCTGATCACAACATATGAAGGGCAGCATAACCATCCACTCCCTCCCACAACATCTGTAGCTGCCTCAATGCCAAGCATATTAGAAAGTGCTTCACTTCCATGCTCTCGGAACATGGCAACTCTCTCTGCCTCAGCCCCATTTCCCACCATCACATTGGACCTCACTCAAAATGCAACCAATTCCTCACAGCTACAAAGGGAATTACCACTGGGCCAACTTGGCCTCCTATCCCCACTTTTGGCTCATAAGTTCATGTCAGTCCCTAAAATATTTGGACAGGGAATGGACACAAATTCATCGTTTGCTAACATATTAAATGCAGCCACTGCAGACCCCAATTTCACTGCAGCTCTTGTGGCAGCTATAACATCTGTCATGGGAACTTCACATTCAAACACCAATGCCACCAATAGTACAAGTGGAGATGAGTAG | 1335 | 0.4307 | MEPTWNDAIVNVSNSSDPIMSFRGTPLVMDELDFFAQKRKVSANDDDHQRVEDLHVDTSLDLLTKNDTDVNNRSTEEDAALETMDDKSNEFIALLTELDQMNAENQRLRELVDQVNNNCNTLRMQLVKLTQKHHSHGNNGVIGEKEDMVPRSFLDIGVAEKDEPNSQQSSEGKLRESKSMVELGHGKDIAVLEAYKLDSTAGRESTKARMEGRQISTEQEFSNKVPRLDPASETMSMIKKARVSVRAKSYSSMIADGCQWRKYGQKMAKGNPWPRAYYRCTMSTGCPVRKQVQRCAEDRSVLITTYEGQHNHPLPPTTSVAASMPSILESASLPCSRNMATLSASAPFPTITLDLTQNATNSSQLQRELPLGQLGLLSPLLAHKFMSVPKIFGQGMDTNSSFANILNAATADPNFTAALVAAITSVMGTSHSNTNATNSTSGDE | 444 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma02g02755 | 444 | ProSiteProfiles | WRKY domain profile. | 249 | 315 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gma02g02755 | 444 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 10 | 438 | IPR044810 | GO:0003700 | |
Gma02g02755 | 444 | Coils | Coil | 84 | 132 | - | - | |
Gma02g02755 | 444 | SUPERFAMILY | WRKY DNA-binding domain | 251 | 315 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gma02g02755 | 444 | MobiDBLite | consensus disorder prediction | 158 | 178 | - | - | |
Gma02g02755 | 444 | SMART | WRKY_cls | 254 | 314 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gma02g02755 | 444 | Gene3D | WRKY domain | 239 | 316 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gma02g02755 | 444 | Pfam | WRKY DNA -binding domain | 256 | 313 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gma02g02755 | 444 | PANTHER | WRKY TRANSCRIPTION FACTOR 6-LIKE | 10 | 438 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma02g02755 | Gma-Chr2 | 53185354 | 53187654 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma02g02755 | 28 | 438 | WRKY Transcription Factor Family | AT1G62300 | 41.057 | 1.16e-90 | 283 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Gma02g02755 | WRKY | 2.2e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma02g02755 | - | - | gsj:114372133 | 856.67 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma18g00959 | 18 | 11902947 | 11906143 | Gma02g02755 | 02 | 53185354 | 53187654 | PCT | |
Gma08g02907 | 08 | 45384174 | 45386892 | Gma02g02755 | 02 | 53185354 | 53187654 | PCT | |
Gma18g00796 | 18 | 8940205 | 8943947 | Gma02g02755 | 02 | 53185354 | 53187654 | PCT | |
Gma08g02993 | 08 | 46489460 | 46494522 | Gma02g02755 | 02 | 53185354 | 53187654 | PCT | |
Gma02g02755 | 02 | 53185354 | 53187654 | Gma18g00796 | 18 | 8940205 | 8943947 | PCT | |
Gma02g02755 | 02 | 53185354 | 53187654 | Gma08g02993 | 08 | 46489460 | 46494522 | PCT |