Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02752 ATGGCCAATTTGCCCCAATCCTTCTCCTTAAGCGGCGCCTCGTTTGGAGCTCCTTCTTCTTCTTCTTCTGCCACCACCAAGGATCCAAGGACGATGGCGTCTGTGGAACACCTCGTTCTCCAACTCAGCAACCCCGATCTCCGAGAAAACGCTCTCCATGAACTCTCCAAGAAGAGGGAGTTATTTCAGGATCTTGCTCCGTTATTGTGGAATTCTCTTGGCACCATGGCAGCACTTTTACAGGAAATAGTTTCAATTTACCCTGCTATTTCACCTCCAAACCTTACTCCAGCACAATCAAATCGAGTGTGCAATGCTCTTGCTCTTCTTCAGTGTGTGGCATCTCACCTTGATACAAGGATGCCATTCCTCAATGCTCATATACCTCTATATCTGTATCCCTTCCTTAATACAACCAGTAAGTCCAGACCATTTGAGTATTTGAGGCTTACCACTCTTGGAGTCATTAGTGCCTTAGTGAAGGTTGATGATACAGAGGTTATAAGTTTCCTTCTTTCAACAGAGATTATTCCGCTGTGCCTGCGCAGTATGGAAATGGGCAGTGAATTGTCAAAAACTGTTGCAACCTTTATAGTTCAAAAAATTCTGTTGGACGAAATGGGTTTGAAATATATTTGCACTACAGCAGAGCGCTTTTATGCAGTAGGTCGAGTTTTGGGAAACATGGTGGCAACTCTTGTTCAGCAACCTTCATGTCGTCTTTTGAAGCACATTATTCGTTGTTATCTTCGTCTGTCTGATAATCAGAGTGCTTGTGAGGCATTAAGAGCCTGTCTTCCGGACATGTTAAGAGATGCTACGTTCAGTAGTTGCCTTCGTGAAGACCCAACAGCTAGGAAGTGGCTACAGCAGTTGCTTCATAATATTGGAGTCAATCGGGTTCCTGCACTACAAGGTGGAGGAGGCTTCGATCATATGATGGGGTCGTGA 951 0.4479 MANLPQSFSLSGASFGAPSSSSSATTKDPRTMASVEHLVLQLSNPDLRENALHELSKKRELFQDLAPLLWNSLGTMAALLQEIVSIYPAISPPNLTPAQSNRVCNALALLQCVASHLDTRMPFLNAHIPLYLYPFLNTTSKSRPFEYLRLTTLGVISALVKVDDTEVISFLLSTEIIPLCLRSMEMGSELSKTVATFIVQKILLDEMGLKYICTTAERFYAVGRVLGNMVATLVQQPSCRLLKHIIRCYLRLSDNQSACEALRACLPDMLRDATFSSCLREDPTARKWLQQLLHNIGVNRVPALQGGGGFDHMMGS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02752 316 SUPERFAMILY ARM repeat 36 250 IPR016024 -
Gma02g02752 316 Gene3D - 27 297 IPR011989 -
Gma02g02752 316 MobiDBLite consensus disorder prediction 1 28 - -
Gma02g02752 316 PANTHER UNCHARACTERIZED 1 314 - -
Gma02g02752 316 Pfam Cell differentiation family, Rcd1-like 38 296 - -
Gma02g02752 316 PANTHER BNAA05G20110D PROTEIN 1 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02752 Gma-Chr2 53164568 53168661 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Gma02g02752 Rcd1 3.4e-127 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02752 K12606 - gmx:100801266 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02752 02 53164568 53168661 Gma02g02752 02 53164568 53168661 ECH
Gma14g00185 14 1562722 1567152 Gma02g02752 02 53164568 53168661 GST
Gma18g00801 18 9003526 9011703 Gma02g02752 02 53164568 53168661 PCT
Gma08g02989 08 46459695 46468441 Gma02g02752 02 53164568 53168661 PCT
Gma02g02752 02 53164568 53168661 Gma18g00801 18 9003526 9011703 PCT
Gma02g02752 02 53164568 53168661 Gma08g02989 08 46459695 46468441 PCT