Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02738 ATGGTTGAAGTGGGTATTTATCAGATCCCTACGAGCAGTTTGGACCCATTTGCGGAGGCAAAAGAAACAGATGCACCAGGGGCGAAAGAATATGTTCATATCCGCATACAGCAGAGGAATGGGAAGAAGAGTCTCACCACAGTGCAAGGGCTGAAGAAAGAGTTCAGCTACGAGAAGATCCTCAAAGACCTCAAGAAAGAGTTGTGCTGCAATGGCAATGTTGTGCATGACAAGGAGCTTGGCAAGATTATCCAACTCCAAGGCGATCAGCGAAAGAACGTCTCTCACTTTCTCATTCATGCTCGCCTTGCTAGGAAGGACCAGATCAAGATTCATGGTTTCTGA 345 0.4667 MVEVGIYQIPTSSLDPFAEAKETDAPGAKEYVHIRIQQRNGKKSLTTVQGLKKEFSYEKILKDLKKELCCNGNVVHDKELGKIIQLQGDQRKNVSHFLIHARLARKDQIKIHGF 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02738 114 CDD eIF1_SUI1 30 113 IPR005874 GO:0003743
Gma02g02738 114 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 12 114 IPR005874 GO:0003743
Gma02g02738 114 PANTHER PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG 1 114 - -
Gma02g02738 114 Gene3D - 5 114 - -
Gma02g02738 114 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 114 - -
Gma02g02738 114 PIRSF Transl_init_SUI1_Euk 3 114 IPR005874 GO:0003743
Gma02g02738 114 Pfam Translation initiation factor SUI1 29 100 IPR001950 GO:0003743|GO:0006413
Gma02g02738 114 ProSiteProfiles Translation initiation factor SUI1 family profile. 32 102 IPR001950 GO:0003743|GO:0006413
Gma02g02738 114 SUPERFAMILY eIF1-like 12 114 IPR036877 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02738 Gma-Chr2 53062247 53062591 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02738 1 114 Eukaryotic Initiation Factors Gene Family AT5G54940 79.825 2.12e-62 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02738 K03113 - gmx:100499886 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02738 02 53062247 53062591 Gma02g02738 02 53062247 53062591 ECH
Gma14g00202 14 1699568 1701162 Gma02g02738 02 53062247 53062591 GST
Gma18g00832 18 9649119 9658319 Gma02g02738 02 53062247 53062591 PCT
Gma08g02970 08 46212761 46214653 Gma02g02738 02 53062247 53062591 PCT
Gma02g02738 02 53062247 53062591 Gma18g00832 18 9649119 9658319 PCT
Gma02g02738 02 53062247 53062591 Gma08g02970 08 46212761 46214653 PCT