Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02722 ATGAGTTTCTTTTCATGTTGCACGTCACAAGAGAAGATAGACAAGAGCCCATTGAAAAGGAGCAGTAAGAACTACCATCACGCAAAAGCTCTGCCATCGTTAGCCAGCTTGTGTTTTAAATCTGGTACCAGCAAACGGAGGTACATAGAAGAAGAAATAGCAAAAATTGGGAAAGGGAATATTACCTCTCAGACTTTTTCTTATCACGAGCTATGTGTTGCAACTCGGAACTTTCACCCTGACAATATGATTGGGGAAGGAGGCTTTGGAAGGGTATACAAAGGACGCCTCAAAAACATAAATCAGGTTGTTGCTGTGAAGAAACTTAATAGGAATGGATTCCAAGGAAACAGGGAATTTCTTGTAGAGGTTTTGATTTTGAGTCTCTTGCATCACCCTAACCTTGTCAATTTGGTAGGGTATTGCGCAGACGGTGAGCAAAGGATTTTGGTATACGAGTACATGGCGAATGGCTCTTTAGAAGATCACCTTCTTGAACTACCTCCGGACAGaaagcctttggattggcgtacaagaatgaacattgcagcaggtgcagctaaaggacttgaatatttacatgaagtcgcaaatccgcctgtgatataccgtgatttcaaagcatcaaacatactattagatgaaaacttcaatccaaagctctctgattttggacttgcaaagcttggtccaactggtgataaaactcatgtatctaccagggtgatgggaacttatggatattgtgcgcctgagtatgcctcaacaggtcaattgactacaaaatcagatatatatagctttggagtagtgtttctagagatgatcacaggaagaagagcaattgatcagtcaagaccatctgaagagcaaaacttagtcacttggGCACAACCCCTATTCAAAGACAGAAGGAAATTTTCATCAATGGCTGATCCATTGCTGAAAGGGAACTACCCAACAAAGGGTCTACACCAAGCCCTAGCAGTTGCAGCAATGTGTATTCAGGAGGAAGCTGATACCAGACCTTTGATTAGTGACGTAGTTACAGCTCTTGATGTTTTAGCAAAGAGGCATATACAAGTGGGAAGACAACAACGTTCAAAAGATTCTTTTTTCGAGCATGGGGAATGCAGTTGA 1140 0.2833 MSFFSCCTSQEKIDKSPLKRSSKNYHHAKALPSLASLCFKSGTSKRRYIEEEIAKIGKGNITSQTFSYHELCVATRNFHPDNMIGEGGFGRVYKGRLKNINQVVAVKKLNRNGFQGNREFLVEVLILSLLHHPNLVNLVGYCADGEQRILVYEYMANGSLEDHLLELPPDRKPLDWRTRMNIAAGAAKGLEYLHEVANPPVIYRDFKASNILLDENFNPKLSDFGLAKLGPTGDKTHVSTRVMGTYGYCAPEYASTGQLTTKSDIYSFGVVFLEMITGRRAIDQSRPSEEQNLVTWAQPLFKDRRKFSSMADPLLKGNYPTKGLHQALAVAAMCIQEEADTRPLISDVVTALDVLAKRHIQVGRQQRSKDSFFEHGECS 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02722 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Gma02g02722 379 Pfam Protein kinase domain 79 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02722 379 Gene3D Phosphorylase Kinase; domain 1 50 154 - -
Gma02g02722 379 ProSiteProfiles Protein kinase domain profile. 78 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02722 379 PANTHER RECEPTOR SERINE/THREONINE KINASE 1 379 - -
Gma02g02722 379 CDD STKc_IRAK 84 353 - -
Gma02g02722 379 Gene3D Transferase(Phosphotransferase) domain 1 155 375 - -
Gma02g02722 379 ProSitePatterns Protein kinases ATP-binding region signature. 84 108 IPR017441 GO:0005524
Gma02g02722 379 PANTHER OS07G0668900 PROTEIN 1 379 - -
Gma02g02722 379 SUPERFAMILY Protein kinase-like (PK-like) 64 357 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02722 Gma-Chr2 52921246 52923925 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02722 60 356 Glycoside Hydrolase AT3G07070 71.717 7.20e-163 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gma02g02722 Pkinase 1.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02722 - - gmx:100797557 769.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02722 02 52921246 52923925 Gma14g00217 14 1855412 1858215 ECH
Gma02g02722 02 52921246 52923925 Gma02g02722 02 52921246 52923925 ECH
Gma14g00217 14 1855412 1858215 Gma02g02722 02 52921246 52923925 GST
Gma08g02944 08 45919012 45922021 Gma02g02722 02 52921246 52923925 PCT
Gma02g02722 02 52921246 52923925 Gma08g02944 08 45919012 45922021 PCT