Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02713 ATGTGTCAGAAGCAGTGCCGAGATGAGAATGGGTTTAAATGCCATTGCATGAGTGAAGGGCACCAGCGTCAAATGCAGATTTTTGGACAAAACCCACACCGGATAGTTGAGGGCTATTCCGAAGAGTTTGAGAGTACTTTTCTGGAGCACATGAAGCGCAGTCACCGATTCAGCCGTGTGGCAGCCACTGTAGTTTATAACGAATACATAAATGACAGACACCACATTCATATGAACTCTACTCAGTGGGCCACGCTTACTGAGTTTGTTAAGTACTTGGGTCGAACTGGCAAATGTAAGGTTGAGGAAACACCCAAGGGATGGTTCATTACATACATAGACAGAGATTCCGAAACCCTTTTCAAGGAGAGGATGAAGAATAAGAGAATCAAGGCAGATATGGTAGATGAAGAAAAGCAAGAGAAGGAGATCAGGAGACAGATTGAAAAGGCTGAGCAAATGATGCAGCCGCCTACTTCTGAGGCTGATCAGCCTTCACAGGTTGAGCCTCCGAGGGAACTAAATATGGAAGATGGAATCAAGATAGGATTTTCTCTTGGGTCAACATCAGCTAAACCTGTGGTCAAGGAAAAACATGACGCGTCAAGGGTGGTGTTTGATGAGGGTGATGAAGAGAAATATAATGGAAGGAATCCCGGAAACAATTTGAAGAGGAAAGAAAGTGGTGGTGGAAAATCAGCTTTGGATGAAATGATGAGGGAAGAAGAGAAGAAAAAGGAAAAAATTAATCGGAAGGATTATTGGTTGCACGAGGGAATTGTTGTCAAGGTTATGAGCAAAGTCTTGGCAGAGAAGGGGTACTACAAGCAAAAGGGTGTTGTGCGGAAGGTGATTGACAAGTATGTTGGGGAAATAGAAATGCTTGAAAGCAAGCACGTGCTCAGAGTTGATCAGGCCGAGCTTGAAACTGTGATTCCACAAGTTGGGGGGCGTGTAAAAATAGTCAATGGTGCATATCGAGGATCAATTGCTAAGCTGTTGGGGGTGGATACAGATAATTTTTGTGCTAAGGTGCAGATTGAGAAAGGAGCTTATGATGGCAGAGTACTTAAATCTGTGGAATATGAGGACATTTGTAAAGTAGCCTATATACTTTGTGATACTCATATTCTGTGTAATGCATATAGAAAACAACTGCTTGGAATTCAAACTGCAGCAATGCTATATATAGTACAAATTGTTTCTGCACGAATGAGACAACCAGAAATGGAGAGTGAGTCGGTGAAACGCAGAATTCACATGATTGCTGCTCACTTTGCACCCAATGATGATATTTCAACTACCCACGTTCTGCCTATGAACTGTAGTGGCAGTCTGAACTCTGTGCTCCGGAGATGTGATAATAAGGTGTATTTTGCACGCCAAGCATCTGCTTCTCTTGGTTATTTTATGAGGCAGACTTCAATTGAAGAGGGTGGCTCAACTGGCTTTATTGCTCCCAAAACCCATCCTGGTGCTGCTGCATCTGAAGGTCCTTCTAATGCAAGAGCACCATGTTTTGCTAAACCTGCAAGGGCAGAATCAGTCTTCACAAATTCAGTGGTCCAACCAATGGCTCAGGAACAGGGCTGTGATTTTAGTACACTTGATCCTCCTACATTTGCTAGACCAAGCAGACAGATTAGAGGAGATAAGTTACATTCTGAAAAGAAAGCGTGCTATTCTGAAATTGGTGGAATTGAGTGGTCTCCAAGGATGGATGTTGCAGAATCAGAAGGCAAATATGTTATCATGGTGGAAGTTCCAGGTGTCAGTATCGGTGACATAAGAGTGGAGGTTGATGATCTAAAGTTGTATGTTAAAGGTAGACGCTCTACTAGCTCCTGGACAGTTGCAGGCTGTACAAATGCTTCACTTTCTTCATATCATCGAAGAGAAATACTATATGGACCATATGAGGTGATCTGGCCACTTCCTGCTGGTGTGAACAAGGACAGAATATCTGCTGAATTTTTGGATGGATTTCTACAAATTATAGTTCCTAAAGTTTGA 2013 0.4272 MCQKQCRDENGFKCHCMSEGHQRQMQIFGQNPHRIVEGYSEEFESTFLEHMKRSHRFSRVAATVVYNEYINDRHHIHMNSTQWATLTEFVKYLGRTGKCKVEETPKGWFITYIDRDSETLFKERMKNKRIKADMVDEEKQEKEIRRQIEKAEQMMQPPTSEADQPSQVEPPRELNMEDGIKIGFSLGSTSAKPVVKEKHDASRVVFDEGDEEKYNGRNPGNNLKRKESGGGKSALDEMMREEEKKKEKINRKDYWLHEGIVVKVMSKVLAEKGYYKQKGVVRKVIDKYVGEIEMLESKHVLRVDQAELETVIPQVGGRVKIVNGAYRGSIAKLLGVDTDNFCAKVQIEKGAYDGRVLKSVEYEDICKVAYILCDTHILCNAYRKQLLGIQTAAMLYIVQIVSARMRQPEMESESVKRRIHMIAAHFAPNDDISTTHVLPMNCSGSLNSVLRRCDNKVYFARQASASLGYFMRQTSIEEGGSTGFIAPKTHPGAAASEGPSNARAPCFAKPARAESVFTNSVVQPMAQEQGCDFSTLDPPTFARPSRQIRGDKLHSEKKACYSEIGGIEWSPRMDVAESEGKYVIMVEVPGVSIGDIRVEVDDLKLYVKGRRSTSSWTVAGCTNASLSSYHRREILYGPYEVIWPLPAGVNKDRISAEFLDGFLQIIVPKV 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02713 670 Gene3D - 313 369 IPR014722 -
Gma02g02713 670 Gene3D - 566 670 IPR008978 -
Gma02g02713 670 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 564 670 IPR002068 -
Gma02g02713 670 MobiDBLite consensus disorder prediction 206 220 - -
Gma02g02713 670 Gene3D - 31 131 IPR038254 -
Gma02g02713 670 SMART Kin17_mid_2 23 149 IPR019447 -
Gma02g02713 670 Pfam Domain of Kin17 curved DNA-binding protein 23 148 IPR019447 -
Gma02g02713 670 PANTHER BNAA05G13760D PROTEIN 1 369 - -
Gma02g02713 670 CDD KOW_KIN17 315 368 IPR041995 -
Gma02g02713 670 CDD ACD_sHsps-like 574 669 - -
Gma02g02713 670 SUPERFAMILY HSP20-like chaperones 565 670 IPR008978 -
Gma02g02713 670 MobiDBLite consensus disorder prediction 151 172 - -
Gma02g02713 670 MobiDBLite consensus disorder prediction 206 239 - -
Gma02g02713 670 Coils Coil 127 154 - -
Gma02g02713 670 Coils Coil 232 252 - -
Gma02g02713 670 Pfam KN17 SH3-like C-terminal domain 251 304 IPR041330 -
Gma02g02713 670 Gene3D - 259 312 - -
Gma02g02713 670 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 1 369 IPR037321 -
Gma02g02713 670 Pfam Hsp20/alpha crystallin family 575 669 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02713 Gma-Chr2 52852456 52859459 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02713 1 369 C2H2 Transcription Factor Family AT1G55460 67.700 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02713 K13102 - gmx:100785931 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00225 14 1914175 1922415 Gma02g02713 02 52852456 52859459 GST