Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02693 ATGATCCCACAACAAGAACCCGATTTCAATCTCAATCACCTCAAATTATATTACGGAAAGCTGTTTCCGTTTGCTGATTTAGTTAGATGGGTGTCGTATGGCAACGATGGAAAGCACCCTGGTTGTGATCAATCCTACATTGGGCGAAGAGAGTTTTCCTTCACTCTGGAGAATGATATATATCTGCGTTTCCAATCTTTCCACAATGCACTTGAGCTCGAAAACTCCATCAAAGAAAAGACCCCTGTTAAGATAGATATTGGACCTGTCTACACTGTTGATCCTGCAAAAAGGAATGCCTATGCACAGAGTGGCGATAATAATGTCTTTGCCCCGGTTGAGAGGGAGTTAATTTTTGATATAGATATGTCAGATTATGATGATGTTAGATACTGCTGTTCGGGTGCTGATGTTTGTTTGGTTTGCTGGCCGTTGATGACTATAGCGATCAAAGTGATTGATACTGCCTTAAGAGATGACTTTGGTTTCAAGCACATTCTCTGGGTATACAGTGGTCGCAGAGGTGTTCATTGTTGGGTCTGTGATGGAAAGGCGAGAAGGTTGACAAATGAGCAAAGAGGAGCTATTGCTGACTATTTTCGTGTCTACAAGGGCAATGAAAACAGTCACAAGAAGGTTTCTTTGATGGGTGCTGCTCTTCATCCTTTCTTGGCGACGTCATACACTAATGTTCTCAAGAACTATTTTGAGAAAAATCTGCTTACTGGTCAAAATTTACTTGCTACCGAGGAGAGATATGAAAAGATCCTTGACATGATTCCTGATGAATCTATTGCTTCTGAACTTAGGGGAAGATGGCAAGATAGTAGGCGCTCTTCTAGTGCAAAAGAAGACATCAATGTTGTTCGTTGGGAACAGTGCAAACAGTTGCTGCAATCTGGAAAACATAAGGCACAAGGGCTGCGTCGGTGCATTGAAGAGATTGTGTTCTGCTTTACCTATCCCAGGCTAGATATGGAGGTTTCTAAACATATGAATCATTTGCTTAAAGCACCATTTTGTGTACATCCTAAAACAGGTCGTGTTTGTGTCCCTATTGATCCAAAACGGTGCGAGGAGTTTGATCCTACTACAGTACCCACCCTTTCACAGCTGATAGAAGAGCTTAATTATGAAGGCTCAAGAGCTGATGTTGATGGTGAATCGAATAGAACTTCGCTTGGAAATGCAATTACGCTTTTCAGATCATCATTCTTACAGCCTTTACTAAAAGCCTGCAAGGAGGAGATTGAAAATTCCTATAACTTAAAATTGCAGCAGTCAAAGAATTCCCTTGGTTGGTAG 1305 0.4138 MIPQQEPDFNLNHLKLYYGKLFPFADLVRWVSYGNDGKHPGCDQSYIGRREFSFTLENDIYLRFQSFHNALELENSIKEKTPVKIDIGPVYTVDPAKRNAYAQSGDNNVFAPVERELIFDIDMSDYDDVRYCCSGADVCLVCWPLMTIAIKVIDTALRDDFGFKHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSHKKVSLMGAALHPFLATSYTNVLKNYFEKNLLTGQNLLATEERYEKILDMIPDESIASELRGRWQDSRRSSSAKEDINVVRWEQCKQLLQSGKHKAQGLRRCIEEIVFCFTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPKRCEEFDPTTVPTLSQLIEELNYEGSRADVDGESNRTSLGNAITLFRSSFLQPLLKACKEEIENSYNLKLQQSKNSLGW 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02693 434 CDD AE_Prim_S 23 363 IPR014052 GO:0003896|GO:0006269
Gma02g02693 434 SUPERFAMILY Prim-pol domain 11 377 - -
Gma02g02693 434 TIGRFAM primase_sml: putative DNA primase, eukaryotic-type, small subunit 15 375 IPR014052 GO:0003896|GO:0006269
Gma02g02693 434 Gene3D DNA primase, PRIM domain 2 415 - -
Gma02g02693 434 PANTHER DNA PRIMASE 20 434 - -
Gma02g02693 434 Pfam DNA primase small subunit 119 354 IPR002755 GO:0003896|GO:0006269
Gma02g02693 434 PANTHER DNA PRIMASE SMALL SUBUNIT 20 434 IPR014052 GO:0003896|GO:0006269
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02693 Gma-Chr2 52695956 52700892 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02693 3 434 Core DNA Replication Machinery Family AT5G41880 67.206 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02693 K02684 - gmx:100780574 899.812