Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02687 ATGTCATCCAACAGTTCTTTGAATATGGAATTGTCAAAGAAGACATCATTTTTGGGTTTGAAACGATGGGTTTTGATTGGGATAGGTGTCGGTGCATTTATTGTGCTAATTCTGTGTATATTATCGATATGGGCGATGTTTCGGAGAAAGTGTAGGAGATCTCTGGACAAGTATTCTGTATCCCAAATACCAAATGTCTCAAAAGATATAGATGTTGACAAGGTTGGGGTGCAGAGTTCTCATGTTCAACCAGAAAATGTGGTTATTCCTGTTCATGACAAGGCAAGTGATAAGAATTCAGATAATGTATCAGTTCATTTAGGGAAGAGCAAATCTGGTGATCCTGATAATATCAGTCAGTGCAGCTCAATTTATCATCATGAGAGAGGATTTAGTTCAATGTCGGCCGAAGAAGGAAGCTCTGGGAATGTTAAGAAGCAATCTACATTGTCACATGGAGGGCTGGCCACTGCCTCTCCTTTAGTTGGCTTACCAGAATTTTCTCATCTTGGGTGGGGCCACTGGTTTACACTTAGAGATCTGGAAATGGCAACCAATCGTTTCTCAAGCGAAAACATCATTGGTGAAGGTGGATATGGCATTGTTTACAGGGGCAGACTGATTAATGGGACTGAGGTGGCAGTGAAGAAGCTTCTTAACAACTTGGGACAAGCTGAGAAAGAATTCAGGGTTGAAGTGGAGGCTATCGGCCATGTTAGACATAAGCATCTTGTACGCCTTCTTGGATATTGTGTAGAAGGAGTTCATAGGCTGCTTGTGTATGAATATGTGAACAATGGTAACTTAGAACAATGGTTACATGGAAACATGCACCAATATGGGACGCTTACCTGGGAGGCCCGCATGAAAGTTATACTTGGCACTGCCAAAGCGCTTGCTTATTTACATGAAGCAATAGAACCAAAagttattcaccgggatataaagtctagcaacatattgattgacgatgaattcaatgcaaaggtttctgattttggtctggccaaacttttggattcaggcgaaagtcacataaccactagagtaatgggaacgtttggTTACGTGGCACCAGAATATGCTAACAGTGGTTTGTTAAATGAGAAGAGTGACATTTACAGCTTTGGTGTCCTCTTACTGGAAGCAGTTACTGGAAGGGATCCTGTAGACTATGCGCGCCCTGCTAATGAGGTTAATCTAGTTGAATGGCTCAAAACAATGGTGGGGACAAGGAGGGCCGAAGAAGTAGTGGACTCAAGCCTTGAAGTTAAACCACCGCTGCGTGCTTTGAAGCGCACTCTTTTGGTTGCACTCAGGTGTATTGATCCTGACGCTGACAAGAGGCCTAAAATGAGTCAAGTTGTGAGGATGCTTGAAGCTGACGAATATCCATTTCGAGAGGATAGAAGGAAAAGAAAGAGTGGCACTGCCAGCATGGAAATTGAAACCGTGAAGGATATTTCTGGTCCATCTGATGCTGAAAAGATGGTAATTTCTGAAAGCCACGTTGAAGAAGGATAG 1524 0.3898 MSSNSSLNMELSKKTSFLGLKRWVLIGIGVGAFIVLILCILSIWAMFRRKCRRSLDKYSVSQIPNVSKDIDVDKVGVQSSHVQPENVVIPVHDKASDKNSDNVSVHLGKSKSGDPDNISQCSSIYHHERGFSSMSAEEGSSGNVKKQSTLSHGGLATASPLVGLPEFSHLGWGHWFTLRDLEMATNRFSSENIIGEGGYGIVYRGRLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKHLVRLLGYCVEGVHRLLVYEYVNNGNLEQWLHGNMHQYGTLTWEARMKVILGTAKALAYLHEAIEPKVIHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANSGLLNEKSDIYSFGVLLLEAVTGRDPVDYARPANEVNLVEWLKTMVGTRRAEEVVDSSLEVKPPLRALKRTLLVALRCIDPDADKRPKMSQVVRMLEADEYPFREDRRKRKSGTASMEIETVKDISGPSDAEKMVISESHVEEG 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02687 507 Pfam Protein kinase domain 189 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02687 507 PANTHER RECEPTOR-LIKE KINASE PLANT 2 506 - -
Gma02g02687 507 SMART serkin_6 188 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02687 507 Gene3D Transferase(Phosphotransferase) domain 1 264 476 - -
Gma02g02687 507 PANTHER OS01G0323000 PROTEIN 2 506 - -
Gma02g02687 507 MobiDBLite consensus disorder prediction 101 119 - -
Gma02g02687 507 Gene3D Phosphorylase Kinase; domain 1 169 263 - -
Gma02g02687 507 Coils Coil 208 228 - -
Gma02g02687 507 MobiDBLite consensus disorder prediction 467 507 - -
Gma02g02687 507 ProSitePatterns Protein kinases ATP-binding region signature. 194 217 IPR017441 GO:0005524
Gma02g02687 507 ProSiteProfiles Protein kinase domain profile. 188 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02687 507 SUPERFAMILY Protein kinase-like (PK-like) 172 461 IPR011009 -
Gma02g02687 507 CDD STKc_IRAK 194 460 - -
Gma02g02687 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Gma02g02687 507 MobiDBLite consensus disorder prediction 93 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02687 Gma-Chr2 52654745 52658215 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02687 5 462 Trihelix Transcription Factor Family AT1G70460 39.741 2.43e-97 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Gma02g02687 Pkinase 2.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02687 - - gmx:100778444 1006.9