Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02682 ATGAAAGCCGGTAGTTTGCATGGTTCCTCAACCTGCATTCTCCATCCACGTTCTTTAAATCTCAGGACTCAGCAGACACGGAACAAGACCTCGAGCAGCAAGGAGAGTTTCAAGATTTGTCATCCAACAGAGGCCAGGAAGAACTTGATTGCCTTGGAAGACATTCTTCTCGGTCACCCTTCCTCTTTGTCCCCTCATGAATACAAAAGCACAAATAAGTCCATTAATCCAAAGTTCCCTAGTGGAAGACTGTGTCTTATGTTTGGTGAAATGGATAGAAAACAAGAACAAGACAAGGGAAACTCAAACATGTCTGGCACGGATGTAGCTCTAATATCTCCCAAAGTCCCAAAAGCAGTTTCACCACTTTCTTCTGCAGCAGAAGGGGACACCTTAAGGCGACCACGTGGCCGGCCGGCCGGCTCCAAAAACAAACCTAAGCCACCAATAATTGTCACCAGAGATAGTGCTAATGCACTGAAGGCTCATGCCATGGAAGTGAGCTCTGGCTGTGATGTGAATGAAAGTTTGTCTAACTTTGCAAGGAGAAAGCAACGTGGCCTTTACATATTCAATGGAACAGGCTGTGTAACGAATGTAACGTTGTGCCAGCCAGGCTCATCTGGTGCCATTGTGACACTTCACGGTCGATTCGAGATTCTTTCACTGCTGGGGTCAATCCTTCCCCCACCAGCCCCTCCAGGGATCACAGGCCTCACAATTTACTTGGCAGGTGCTCAAGGGCAAGTTGTGGGGGGTGCTGTGGTTGGTGCTTTGATTGCTTCAGGCCCTCTTGTAATCATGGCTGCATCATTCATGCATGCTACTTTTGATCGCCTTCCATTGGAAGATGATGAACTTGCTGCTGCAATGCAGAATCAGCATTACCAAAATGGACGCACCCACCATCTTGATATTTCTGACTTGTATGCAATGCCACAGAACCTGCTCATGAATGGTACAATGCCCCCAGAGATATACTCTTGGGCACCAGGGCAGAACTTGTCAAAAACCTGA 1017 0.4749 MKAGSLHGSSTCILHPRSLNLRTQQTRNKTSSSKESFKICHPTEARKNLIALEDILLGHPSSLSPHEYKSTNKSINPKFPSGRLCLMFGEMDRKQEQDKGNSNMSGTDVALISPKVPKAVSPLSSAAEGDTLRRPRGRPAGSKNKPKPPIIVTRDSANALKAHAMEVSSGCDVNESLSNFARRKQRGLYIFNGTGCVTNVTLCQPGSSGAIVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGGAVVGALIASGPLVIMAASFMHATFDRLPLEDDELAAAMQNQHYQNGRTHHLDISDLYAMPQNLLMNGTMPPEIYSWAPGQNLSKT 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02682 338 MobiDBLite consensus disorder prediction 120 151 - -
Gma02g02682 338 Pfam Plants and Prokaryotes Conserved (PCC) domain 162 272 IPR005175 -
Gma02g02682 338 ProSiteProfiles PPC domain profile profile. 157 295 IPR005175 -
Gma02g02682 338 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 91 337 IPR014476 GO:0003680
Gma02g02682 338 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 16 91 337 - -
Gma02g02682 338 CDD DUF296 163 243 IPR005175 -
Gma02g02682 338 Gene3D - 160 303 - -
Gma02g02682 338 SUPERFAMILY AF0104/ALDC/Ptd012-like 157 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02682 Gma-Chr2 52618031 52619710 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02682 116 335 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 72.398 1.68e-100 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02682 - - gmx:100788581 453.366