Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02674 ATGATTTTGAAGGTTTCTCTCATTGTGGTTCTCCTAGTGATATGCTCCTGTGTTGTGGAAGCCATTTCTAGGAATCACAATCAAAATCCCAACCACAACAATATCAACAAAAATGGATCTTCTCTGGCTGCAATAAAGTTTCCTGATTATCCAAGTTTCAATGATGTCTCTTCTTCAGGGGACGATTGCAGCTTCTCAAATTCTGAGCAACTCGGACATTCTGGACCTACCATGACATCGGGTGAAGAAACTGATGAAGAGAGTGAAGCTTTTCCAGCACAAAAACCACACCAGAATTTGGTGAAATTCCACTTGAAACACAGGTCAGGGAGCAAAGATGCTGAGCCGAAACAATCTGTGGTTGATTTCACACTAAGTGATTTGACCAGAATTCAGAACCTTCACAGAAGGGTCATAGAGAAGAAGAATCAAAACACCATTTCAAGGCTGCAGAAGTCACAGAAGGAGCAACCAAAGCAGTCCTACAAGCCGGTGGTTGCTGCTCCGGCAGCTTCACGGACAACAAGTCCAGTTTCCGGGCAGCTTGTGGCAACCTTGGAATCCGGGGTGAGTCTTGGCTCTGGAGAGTACTTCATGGATGTGTTTGTGGGGACACCCCCAAAGCATTTTTCTCTGATACTTGATACTGGTAGTGACCTTAATTGGATTCAATGTGTTCCATGCATTGCATGTTTTGAGCAAAGTGGGCCATATTATGACCCCAAAGATTCTAGCTCTTTTAGGAATATAAGCTGTCATGATCCCCGGTGCCAATTGGTTTCAGCCCCCGATCCACCTAAGCCTTGCAAGGCTGAGAATCAGAGTTGTCCATACTTTTATTGGTATGGTGATGGTTCCAACACAACTGGGGATTTTGCATTGGAAACTTTCACTGTTAATCTCACCACTCCTAATGGGACTTCCGAGTTGAAGCATGTGGAGAATGTGATGTTTGGATGTGGTCATTGGAATAGAGGCCTATTTCATGGTGCTGCTGGTTTGTTAGGATTAGGGAAAGGACCATTGTCATTTGCTTCTCAGATGCAATCTCTCTATGGTCAATCCTTTTCCTATTGTCTTGTGGATAGGAATAGCAATGCAAGTGTTAGCAGCAAATTGATTTTTGGTGAGGACAAGGAGCTGCTCAGCCACCCCAATTTGAATTTCACTTCTTTTGGTGGTGGGAAAGATGGTTCAGTTGACACATTTTACTATGTCCAGATAAAGTCTGTTATGGTTGATGATGAGGTGCTGAAGATACCTGAGGAGACTTGGCATTTGTCTTCAGAAGGTGCTGGTGGTACCATAATTGATTCTGGCACCACATTAACATATTTTGCAGAGCCTGCTTATGAGATTATCAAGGAGGCTTTTGTGAGGAAAATTAAGGGCTATCAGCTTGTTGAAGGCCTTCCTCCTCTAAAGCCATGTTACAATGTGTCTGGAATTGAAAAGATGGAGCTACCTGACTTTGGAATCTTGTTTGCTGATGAAGCAGTGTGGAATTTTCCAGTGGAGAATTATTTTATCTGGATTGATCCTGAGGTTGTTTGTTTGGCTATTTTGGGGAATCCTCGATCTGCCCTTTCAATAATTGGAAACTATCAGCAGCAGAATTTCCACATACTGTATGATATGAAGAAATCCAGACTTGGCTATGCACCAATGAAGTGTGCTGATGTTTAA 1686 0.4294 MILKVSLIVVLLVICSCVVEAISRNHNQNPNHNNINKNGSSLAAIKFPDYPSFNDVSSSGDDCSFSNSEQLGHSGPTMTSGEETDEESEAFPAQKPHQNLVKFHLKHRSGSKDAEPKQSVVDFTLSDLTRIQNLHRRVIEKKNQNTISRLQKSQKEQPKQSYKPVVAAPAASRTTSPVSGQLVATLESGVSLGSGEYFMDVFVGTPPKHFSLILDTGSDLNWIQCVPCIACFEQSGPYYDPKDSSSFRNISCHDPRCQLVSAPDPPKPCKAENQSCPYFYWYGDGSNTTGDFALETFTVNLTTPNGTSELKHVENVMFGCGHWNRGLFHGAAGLLGLGKGPLSFASQMQSLYGQSFSYCLVDRNSNASVSSKLIFGEDKELLSHPNLNFTSFGGGKDGSVDTFYYVQIKSVMVDDEVLKIPEETWHLSSEGAGGTIIDSGTTLTYFAEPAYEIIKEAFVRKIKGYQLVEGLPPLKPCYNVSGIEKMELPDFGILFADEAVWNFPVENYFIWIDPEVVCLAILGNPRSALSIIGNYQQQNFHILYDMKKSRLGYAPMKCADV 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02674 561 CDD pepsin_A_like_plant 196 558 IPR034161 -
Gma02g02674 561 Pfam Xylanase inhibitor N-terminal 197 376 IPR032861 -
Gma02g02674 561 Gene3D Acid Proteases 378 561 IPR021109 -
Gma02g02674 561 MobiDBLite consensus disorder prediction 144 160 - -
Gma02g02674 561 MobiDBLite consensus disorder prediction 142 162 - -
Gma02g02674 561 MobiDBLite consensus disorder prediction 58 81 - -
Gma02g02674 561 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Gma02g02674 561 PRINTS Pepsin (A1) aspartic protease family signature 203 223 IPR001461 GO:0004190|GO:0006508
Gma02g02674 561 PRINTS Pepsin (A1) aspartic protease family signature 435 446 IPR001461 GO:0004190|GO:0006508
Gma02g02674 561 PRINTS Pepsin (A1) aspartic protease family signature 530 545 IPR001461 GO:0004190|GO:0006508
Gma02g02674 561 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 212 223 IPR001969 GO:0004190|GO:0006508
Gma02g02674 561 Pfam Xylanase inhibitor C-terminal 404 554 IPR032799 -
Gma02g02674 561 Gene3D Acid Proteases 152 377 IPR021109 -
Gma02g02674 561 ProSiteProfiles Peptidase family A1 domain profile. 197 554 IPR033121 -
Gma02g02674 561 PANTHER ASPARTYL PROTEASE FAMILY PROTEIN 2-LIKE 47 560 - -
Gma02g02674 561 MobiDBLite consensus disorder prediction 58 96 - -
Gma02g02674 561 SUPERFAMILY Acid proteases 189 559 IPR021109 -
Gma02g02674 561 PANTHER ASPARTYL PROTEASES 47 560 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02674 Gma-Chr2 52577607 52579292 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02674 148 558 Miscellaneous Gene Families AT1G77480 25.977 2.81e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02674 K22683 - gmx:100818203 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00261 14 2224612 2231352 Gma02g02674 02 52577607 52579292 GST