Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02668 ATGGATGTGGCCAAGTTACATAACTCTGATGATGATGATGACAAGAAAGAAGATGAAGATGTGCTTCCTGGGTTTAGATTCCATCCAACAGATGAAGAGCTTGTGGGGTTTTATCTGAGACGAAAGGTGGAGAATAAGCCTCTGAGAATTGAACTCATCAAACAGATTGACATCTACAAATATGATCCATGGGATCTTCCAAAAGTGAGTTCAGTGGGGGAGAAGGAATGGTACTTCTTTTGCATAAGAGGGAGAAAATACAGGAACAGCATAAGGCCTAATAGAGTGACAGGTTCTGGATTTTGGAAAGCCACAGGGATTGATAAACCTATATACTGTGTTAAAGAACCCCACGAATGCATTGGTCTAAAGAAATCATTGGTCTACTATCGTGGAAGTGCTGGTAAAGGCACCAAAACTGATTGGATGATGCACGAGTTTCGCCTCCCACCCAATGGAAAAACTAGCAATAATCCACAAGCTAATGATGCTCAAGAAGCTGAAGTGTGGACGCTATGCCGAATATTGAAACGATTCCCCTCTTACAAGAAGTACACACCAAATTTGAAAGACTCAGCAGCAGCACCAATAATGACGAAGCCAAATTACCCCACAAACTCTTCAAGTACTTCCAAAACATGCAGCTTAGAATCTGACAACGGCAAGCCATACTTGACTTTCACAAACTCATTATCACCATTACTCATTCAACAAAATGAAAGGAAACCGGCTATTAATGGACATGTTGACGTTGAACGTAACCACTTATTTCTAGGTCAATTAGGCATTAATGTAGCTCAGGCTCCAACATCCTTGTCTTACTCAAGTTTTTGGAATCGTCATCATCAGAATAATGTGGAATTTGCTAATGAGAATTGGGATGATCTCACGTCTGTGGTTCAGTTTGCTAATATTGATCCATCCAGGGTTTCTGATCATTGTAAAGAATTTAATAGATTTTAA 963 0.3998 MDVAKLHNSDDDDDKKEDEDVLPGFRFHPTDEELVGFYLRRKVENKPLRIELIKQIDIYKYDPWDLPKVSSVGEKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIYCVKEPHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNGKTSNNPQANDAQEAEVWTLCRILKRFPSYKKYTPNLKDSAAAPIMTKPNYPTNSSSTSKTCSLESDNGKPYLTFTNSLSPLLIQQNERKPAINGHVDVERNHLFLGQLGINVAQAPTSLSYSSFWNRHHQNNVEFANENWDDLTSVVQFANIDPSRVSDHCKEFNRF 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02668 320 PANTHER - 3 319 - -
Gma02g02668 320 Pfam No apical meristem (NAM) protein 23 149 IPR003441 GO:0003677|GO:0006355
Gma02g02668 320 Gene3D NAC domain 30 180 IPR036093 GO:0003677|GO:0006355
Gma02g02668 320 SUPERFAMILY NAC domain 20 177 IPR036093 GO:0003677|GO:0006355
Gma02g02668 320 ProSiteProfiles NAC domain profile. 21 178 IPR003441 GO:0003677|GO:0006355
Gma02g02668 320 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 319 - -
Gma02g02668 320 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02668 Gma-Chr2 52545436 52548758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02668 3 178 NAC Transcription Factor Family AT5G39820 57.068 9.73e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma02g02668 NAM 3.5e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02668 - - gmx:100784323 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00268 14 2283798 2287424 Gma02g02668 02 52545436 52548758 GST
Gma18g01065 18 14667855 14669949 Gma02g02668 02 52545436 52548758 PCT
Gma08g02828 08 44480903 44483534 Gma02g02668 02 52545436 52548758 PCT
Gma02g02668 02 52545436 52548758 Gma18g01065 18 14667855 14669949 PCT
Gma02g02668 02 52545436 52548758 Gma08g02828 08 44480903 44483534 PCT