LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma02g02667	ATGGCAAAACAACATGAGGAAGAGAccttcggtttcacctacgatgttttcatcagttttagaggagaggatacaaggaacaattttataggacatcttcgtaaagagttgtcccggaaagggatgaaaattttctttgatgatagggacctgccggtggggaatgttatttcaccttctctatccaaggccattgaagaatctaagattttaatcattgtgttttctaagaactacgcatcctccacatggtgccttgatgaacttgttaagatcctggagcagtccaagatcagtgagatgaaacaacttgttttcccagttttttaccatgtagatccctcagatgtacggaagcaaacagagagttatggtgagcacatgaccaaacacgaagaaaactttggcaaagcctcccagaaactgcaagcttggaggacagctttgtttgaagcaagtaacttccctggccaccatattaccactcgctccgggtatgagatcgattttattgagaagattgttgagaaggtccagaaaaatatagctcctaaaccattatatactggtcaaaaccctgttggacttggaccccgcgtagaagaggtaatgtcactcctagacatgaagccttatgatgaaactgtacgcatgttgggtgtatggggacttggtggagtcggaaaaacagaacttgccaaagctttgtatgacaacattgtgcaaagctttgatgccgcaagttttcttgccgatgttagagagaagttaaacaaaatcaatggcctggaagatctacagaagacacttctatcagagatgcgagaggagctagatattgaattgggcagtgcaattaaaggaatgtttgaaataaaacgcaagcttaaaggaaagaaagttcttctggttcttgatgatgttgatgacaaagacaagttagaaaagttggcaggaggacgtgattggtttggttcaggtagtaggatcattataacaacaagagacaaagatgtgctaattgctcatcaagttgataacatttatcaaatggaagagctcgataaacaacattctcttgagctcttttgttggaatgccttcaaacaaagccatcctaaaacaggctttgaagacgtgtctttgcgtgctatatatgttgccaagggtcttccactggctttaaaagtaataggctctgatttggctacacttgatgaagaaagtttagaagattggaaatgtgcattggaagaatacgagaggactcctcctgaaagaattctagacgtgctcaaaaaaagctacgatagattgggtagcaaaccaaaacaggttttcctggacatagcttgcttcttcaaaggggagaaaaaagaatatgttgaaaatatacttgatgacattggtgcaattacttacaacattaatgtacttgttaaaaaatctctcctaactattgaggatgggtgcttgaagatgcatgatctaatacaagatatgggtagagtgattgttaggcaggaagaaccagataatcctggcgaacgtagcagactatggtactatgaagatgttattgaaatactaactgatgatttgggaagtaataagattcaaggaataatgcttgatccaccccaacgagaagaagtagattggagtggtacagcctttgagaaaatgaaacgactcagaattcttattgttcgaaacacatctttttcatctgagcctgaacatctgccaaatcatttgagggtgcttgactggattgagtatccttcaaagtctttcccatcaaaattctatccaaagaaaattgttgtctttaattttcctagaagccatttaacatTGGAAGAGCCATTTAAGAAATTTCCATGCCTGACTAACATGGATTTCTCGTATAACCAATCTATCACTGAAGTGCCTGATGTGTCCGGAGTTGAAAATCTAAGACAACTGAGACTTGATCAATGTAAAAACCTAACTACTGTTCATGAATCCGTTGGATTTCTCAAAAAGCTTGCCCATTTAAGCGCATCAGGATGCACCAATCTCAGAAATTTCCTGCTAAAGATGTTTCTACCATCTCTGAAAGTTCTTGACCTTAATCTATGCATAATGCTGGAACACTTCCCAGATATAATGAAAGAAATGAAAGAGCCATTGAAGATTTATATGATAAATACTGCTATTAAGGAGATGCCAGAATCCATAGGCAATCTTACTGGGCTTGTTTGCCTAGACATATCAAATAGCAAGGAACTTAAATATCTGCCAAGTAGCGTATTCATGTTGCCAAATGTTGTTGCCTTTAAAATTGGAGGATGTTCTCAACTTAAAAAATCCTTCAAAAGTTTGCAGAGCCCTTCAACGGCCAATGTTCGTCCAACATTACGAACATTACATATCGAGAATGGTGGTTTGTTAGATGAAGATCTTCTCGCAATTCTCAACTGTTTTCCGAAATTAGAGGTGTTAATTGCTTCAAAGAACAATTTTGTCTCTCTCCCTGCATGCATTAAGGAATGTGTTCACTTAACAAGTCTTGATGTAAGCGCTTGCTGGAAGCTCCAAAAGATTCCTGAGTGCACTAACTTGAGAATTCTTAATGTTAATGGTTGTAAGGGTCTTGAGCAAATTTCAGAGTTGCCATCTGGTATTCAAAAAGTAGATGCAAGATATTGCTTCAGCTTAACTAGAGAGACATCAGACATGTTATGCTTTCAGGCAAAGAAAGGTATTTGTGGATTAGAAGTGGTGATGCCTATGCCAAAAAAACAAGTGGTGATTCCAGAATGGTTTGACTTGGTTGGACATGGAGGGAATCCTCATTTCTGGGCTCGTGGCAAGTTCCCTATCTTATCTCTAGCGTTGCTCTTCCAGGATGTGAGAACAGGGCCAATAAAACGCTATGATGACCTTATTGAGCTGCAACTAGTTATCAACTGTCAATGTGTTCCTCGCAAAGGCTATTACAACTTCAGAGTTCCTCCAGATCACATCTTAATTTGTGATCTACGACTTTTATTCAGTGACAAGGAGTGGATTGGCCTTGATGCATTTCTCGACCGTGACTGGAATGAAGTACAGGTTGCTTATGTTGCTGCATCCACCATGACACTAAGTTGTTGGGGTGTTTATGTGTACGAAGGAGGAGCAAACAAGAAAGATGTCCAATTCGAGTGTCCCGATGCCAAGTATTCAGACATGTCACGGGCAGTAGTTCCTACAAAAGATACTAAGCTGGAACGAAGAAAGATGATAGAGAGGTATGGCGCAGGCCAAGCGTTTGATGCAATATCGACTACTTTGTTGGAGGTCTACGAAAATGTAAAGGATTTGCCAGAATATTCTCACCTTCCGTTGAAAGAGAAGTTGAGTACTATACTAGGATTTTATAAGGAGGTATCGAGGCAGGCTGAGGCTGAATTAGAATCCGGACGCTCAGATTTACAAGATAAACACTCTTTCCTCACGGCTTACCTAGAATATGAAATGAATGTCAAAGCATTGGAAGAAGAAGAAGCTTCAACCTCTGTCCATCAGGGCAGTAAGGAGGAGCTACTACACTCCATGCAACATGAATTCTATGATGGAGTGACGGATGGACTTGTTGAAGCACGGAAAAGGTTTCCTTCTCTGGATATTATTAAAATCAGAGGAGCTACCTTAAAGAAGAGGCCGGAGGGTACTTGTGTTGAATGGTTATTCGAAGTACTATTCCATGAAAGAAAGGCATACACTGAAGGAATAGTGAATGGACTCCTTGAAGCAAAGTTGAGCTTTCCAGAGCTGGACATGTGGGCAACAATACATATCGTATTATGTGCAAGAGGCATAGAAGGCTTTCGTGAGGGAATTCGCCCATCGATACAAGTAATTGATGAAGTGGAGGCAGCACCCGTGGATGTAGGAGAAGCTTCAACCTCTGGCCATCAGGGAAGTCAGAAGGAACAAGGCTACGATCCTCAGCAGCAAAAAAAAATATGGGAAATATTCTATTATGGAATTGTGGATGGACTTTTTCAGGCACAAAATAGCTTTCCCTATTTAGATGTTTTTAAAACTGCAAATGCTGCCTTCGACAAGAGGTTTGCATGGTCACCTGAAGGGAATCTCCAAGTACACACGTTGGAAATGAGGACGTACACGAATGGAATCATCAATGGACTCCATGAAGCAAAGCTGAGCTTTCCTGATTTAGACATTTGGGCAACACTAAATGTTGTGTTAAATAGGATAGGCATATATGAAACACCGGCACTTGAATTTGCTTCAAGGATCCTGGATGCAATCAATATAATGGAAGTAGGAGAAGCTCCAACCTCTGGCCTTCAGGAAAGTGATCAGGAGGAGAAGCAAGAAATAATAAGGAAAATAGAATGTGATGGAATGAAGGATGGACTTGTCGAAGCAAAGAAAATGTTTCCTTCTCTAGATGTTATTAAAACCAGAGCTGCTGCCTTCAACAATGGGACTAGGGTTGCATGGTTATTCGTACTACCTCAGGTTGAAATGAAGTTACACATTGAAGGAATTATGAATGGACTTCTTGAAGCAAAGTTGAGATTTCCTGATTTGGACATATGGACAACACTAAATATTGTGTTATGTAGGAGAGGCATGGAAGGCCTCCATGAGAGAATTCGCCCATTGATACGAGTAATGGATGTAGGAGAAGCTTCAACCTCTGGCCATCAAGGAAGTGAGGATGAAGAACAAGGCTACAATGCTAAGCTACAAAAACTAATGGAGACAATATTGTATCAAGGAATGATGGATGCACTTTATGCAGCTCACAATAACTGTCCTTCTCTGAATATTTTTACAACCAAAAGTGCAGCCTTACGTGCCTCAAAAAACCTTAAGTACTTGATTGGAGTTATAACCGATGATAATCCAGCATTACCCATGGTTATGGAGATCATGTACATAAATGGAATTATGAATGGACTCCGTGAAGCAAAGCTGAGCTTTCCTGATTTGGACATGTGGGCAACACTAACAACCGTGTTAAGTAAGATAGGCGTCTGTGAAACATCAATACTTCAATATGCTTCATGTTTCCTGGATACAAACAATACAAAAGAAGTAGGAGAAGCTTCAACCTCAAGCCATCAGGGAATCGGTGTAGCCACAAGAGGAATCTTCAACCTCTCATCACAACAAAATCGTCAAAACTGCGGAAGCCTGGAACCACAACTTGTGTCTTCCAAGGTATCTGGATTTGATCAGAAATCCAGAAATGGAAAAATCTTTACTATGCAGCATGATATGAAGCAGCGGGTGTATTCTTCTTTCAAGGTCGTGGAGAGTCCTGTTGATTCTGCATTGAACCCTGATGGGTCACCATTAACGGCATATCAGTATTTTGAAAATATGAGGAATTTCCTGGTGCGCCTGTCCAAGAATTTGGACTTCCTTCCTTCCTTTGAGGCATCTGATCCGGAGCAAAATAAGAAGCCAGAAGAAGTTTCAACGCTCCAAGCATTCATCATGATGAAGCAAGAAAGACTGGAATTTAAAACCAAGAGTAAACTCTTCTGGAAGTTCAAGGATGAACACAAAGCTATGTGCAACAAATTTGTACAAGAAGAAAATGAAAATGTTGCTCGGATAAAGATAGTGACACAACCAGCTCTTGGAAAAATTAATGTGATGAAATTGATTAAGAAATTCAACATTCAATCTGATGAGTTTATTTCAAAGAAAGCATCACGACCTTGA	5736	0.2753	MAKQHEEETFGFTYDVFISFRGEDTRNNFIGHLRKELSRKGMKIFFDDRDLPVGNVISPSLSKAIEESKILIIVFSKNYASSTWCLDELVKILEQSKISEMKQLVFPVFYHVDPSDVRKQTESYGEHMTKHEENFGKASQKLQAWRTALFEASNFPGHHITTRSGYEIDFIEKIVEKVQKNIAPKPLYTGQNPVGLGPRVEEVMSLLDMKPYDETVRMLGVWGLGGVGKTELAKALYDNIVQSFDAASFLADVREKLNKINGLEDLQKTLLSEMREELDIELGSAIKGMFEIKRKLKGKKVLLVLDDVDDKDKLEKLAGGRDWFGSGSRIIITTRDKDVLIAHQVDNIYQMEELDKQHSLELFCWNAFKQSHPKTGFEDVSLRAIYVAKGLPLALKVIGSDLATLDEESLEDWKCALEEYERTPPERILDVLKKSYDRLGSKPKQVFLDIACFFKGEKKEYVENILDDIGAITYNINVLVKKSLLTIEDGCLKMHDLIQDMGRVIVRQEEPDNPGERSRLWYYEDVIEILTDDLGSNKIQGIMLDPPQREEVDWSGTAFEKMKRLRILIVRNTSFSSEPEHLPNHLRVLDWIEYPSKSFPSKFYPKKIVVFNFPRSHLTLEEPFKKFPCLTNMDFSYNQSITEVPDVSGVENLRQLRLDQCKNLTTVHESVGFLKKLAHLSASGCTNLRNFLLKMFLPSLKVLDLNLCIMLEHFPDIMKEMKEPLKIYMINTAIKEMPESIGNLTGLVCLDISNSKELKYLPSSVFMLPNVVAFKIGGCSQLKKSFKSLQSPSTANVRPTLRTLHIENGGLLDEDLLAILNCFPKLEVLIASKNNFVSLPACIKECVHLTSLDVSACWKLQKIPECTNLRILNVNGCKGLEQISELPSGIQKVDARYCFSLTRETSDMLCFQAKKGICGLEVVMPMPKKQVVIPEWFDLVGHGGNPHFWARGKFPILSLALLFQDVRTGPIKRYDDLIELQLVINCQCVPRKGYYNFRVPPDHILICDLRLLFSDKEWIGLDAFLDRDWNEVQVAYVAASTMTLSCWGVYVYEGGANKKDVQFECPDAKYSDMSRAVVPTKDTKLERRKMIERYGAGQAFDAISTTLLEVYENVKDLPEYSHLPLKEKLSTILGFYKEVSRQAEAELESGRSDLQDKHSFLTAYLEYEMNVKALEEEEASTSVHQGSKEELLHSMQHEFYDGVTDGLVEARKRFPSLDIIKIRGATLKKRPEGTCVEWLFEVLFHERKAYTEGIVNGLLEAKLSFPELDMWATIHIVLCARGIEGFREGIRPSIQVIDEVEAAPVDVGEASTSGHQGSQKEQGYDPQQQKKIWEIFYYGIVDGLFQAQNSFPYLDVFKTANAAFDKRFAWSPEGNLQVHTLEMRTYTNGIINGLHEAKLSFPDLDIWATLNVVLNRIGIYETPALEFASRILDAINIMEVGEAPTSGLQESDQEEKQEIIRKIECDGMKDGLVEAKKMFPSLDVIKTRAAAFNNGTRVAWLFVLPQVEMKLHIEGIMNGLLEAKLRFPDLDIWTTLNIVLCRRGMEGLHERIRPLIRVMDVGEASTSGHQGSEDEEQGYNAKLQKLMETILYQGMMDALYAAHNNCPSLNIFTTKSAALRASKNLKYLIGVITDDNPALPMVMEIMYINGIMNGLREAKLSFPDLDMWATLTTVLSKIGVCETSILQYASCFLDTNNTKEVGEASTSSHQGIGVATRGIFNLSSQQNRQNCGSLEPQLVSSKVSGFDQKSRNGKIFTMQHDMKQRVYSSFKVVESPVDSALNPDGSPLTAYQYFENMRNFLVRLSKNLDFLPSFEASDPEQNKKPEEVSTLQAFIMMKQERLEFKTKSKLFWKFKDEHKAMCNKFVQEENENVARIKIVTQPALGKINVMKLIKKFNIQSDEFISKKASRP	1911

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma02g02667	1911	SUPERFAMILY	L domain-like	508	902	-	-
	Gma02g02667	1911	ProSiteProfiles	TIR domain profile.	12	182	IPR000157	GO:0007165
	Gma02g02667	1911	SUPERFAMILY	Toll/Interleukin receptor TIR domain	7	157	IPR035897	-
	Gma02g02667	1911	Pfam	TIR domain	14	180	IPR000157	GO:0007165
	Gma02g02667	1911	Gene3D	-	184	348	IPR027417	-
	Gma02g02667	1911	Pfam	NB-ARC domain	200	437	IPR002182	GO:0043531
	Gma02g02667	1911	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	20	1114	-	-
	Gma02g02667	1911	SMART	till_3	13	155	IPR000157	GO:0007165
	Gma02g02667	1911	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	186	450	IPR027417	-
	Gma02g02667	1911	Gene3D	Ribonuclease Inhibitor	728	912	IPR032675	-
	Gma02g02667	1911	Gene3D	Ribonuclease Inhibitor	533	727	IPR032675	-
	Gma02g02667	1911	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	20	1114	IPR044974	GO:0006952
	Gma02g02667	1911	PRINTS	Disease resistance protein signature	218	233	-	-
	Gma02g02667	1911	PRINTS	Disease resistance protein signature	388	402	-	-
	Gma02g02667	1911	PRINTS	Disease resistance protein signature	695	711	-	-
	Gma02g02667	1911	PRINTS	Disease resistance protein signature	295	309	-	-
	Gma02g02667	1911	SUPERFAMILY	"Winged helix" DNA-binding domain	427	530	IPR036390	-
	Gma02g02667	1911	Gene3D	-	11	183	IPR035897	-
	Gma02g02667	1911	Gene3D	-	353	440	IPR042197	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma02g02667	Gma-Chr2	52533882	52543660	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma02g02667	14	784	WRKY Transcription Factor Family	AT4G12020	32.494	8.11e-100	355

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma02g02667	-		-	gsj:114376984	3379.34