LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma02g02666	ATGGCAAACCATAAGGATGAGTCCCTTGGtttcactttcacctatgatgttttcctgagttttagaggcgaagatacaaggcacaaatttataggacatctccgtaaagagttgtgccaaaaggggataaaggttttctctgatgataaggacctgaggataggagaaggtatttcacctgctctatccagtgccattgaaaaatctaagattttaatcgttgtgttttctgagaactacgcagagtccacatggtgccttgatgaactcgttaagatcctagaatgtaccaagatcatcatcagggacaagaaacaacttgttttcccaatattttaccatgtagacccctcagatatacggcatcagaaaaaaagttacggtgagcacatgctggaacaccaaaaaaggtttggcaaagactcccagagagtgcaggcatggaggtcagctttgtctgaagcaagtaacttccctggccaccatattagcacaggGtacgaaaccgaatttattgaaaagatagctgacaaggtctataaacacatagctcctaatcctttacatactggtcagaaccctattggactttggccccgcatggaagaggtaatgtcactcctagacatgaagccttatgatgaaactgtacgcatgttgggtgtatggggactccctggagtcggaaaaacagaacttgccacagctttgtataacaacattgtgaaccactttgatgccgcaagttttctttccaatgttagagaaaaatcaaacaaaatcaatggcctggaagatctacagaagacacttctatcagagatgcgagaggagctagatactgacttgggctgcgcaaataaaggaatgtctgaaataaaacgcaagcttgaaggaaagaaggttcttttggttcttgatgatgttgatgacaaagacaagttagaaaagttggcaggaggacgtgattggtttggttctggtagtaggatcattataacaacaagggacaaagatgtgctaattgctcatcaagttgataacatttatcaaatggaagagctcgataaacaccattctcttgagctcttttgttggaatgccttcaaacaaagccatcctaaaacaggctttgaagacgtgtctttgcgtgctatagatgttgccaagggtcttccactggctttaaaagtaataggctctgatttggctacacttgatgaagaaagtttagaagattggaaatgtgcattggaagaatacgagaggactcctcctgaaagaattctagaggtgctcaaaaaaagctacgatagattgggtagcaaaccaaaacaggttttcctggacatagcttgcttcttcaaaggggagaaaaaagaatatgttgaaaatgtacttgatgaggactttggtgcaaaatccaacatcaaagtacttgtcaataaatctctcctaacaattgaggatgggtgcttgaagatgcatgatctaatacaagatatgggtagagatattgtcaggcaggaggcaccaaatccaggggaatgcagcagagtatggtatcatgaggatgttattgacatactaactgatgatttgggaagtgataaaattcaagggataatgcttgatcccccccaacgagaagaagtcgattggaatggtactgcctttgacaaaatgaaacgactcagaattctcattgttcgaaacacatcttttttgtctgagcctcaacatttgccaaatcatttgagggtgctcgactgggaagagtatccttcaaaatctttcccatcaaaatttcatccgaagaaaatcattgtcatcaatttacgtagaagccatttaacatTGGAAGAGCCATTTAAGAAATTTGCATGCTTGACTAACATGGATTTCTCATATAACCAATCTATCACTGAAATGCCTGATGCGTCAGAAGTTCAAAATCTTAGAGAACTGAGACTTGATCATTGTAGAAATCTAATAGCAATTCACCAAACCGTTGGATTTCTCAAAAGGCTTGCTCATTTAAGCGCTTCAAATTGCACCAAACTCAGAAATTTCCTGCAAACAATGTTTCTACCATCTCTAGAAGTCCTTGACCTTAACTTATGTGTAAGGCTTGAACACTTCCCAGAGATAATGAAGGAAATGAATAAGCCATTGAAGATTTATATGATAAATACTGCTATTAAGGAGCTGCCAGAATCCATTGGTAATCTTACTGGGCTTGTTTGTATAGAGATACCAAGTAGCAGGAAACTTAAATATCTACCAAGTAGCTTATTCATGTTGCCAAATGTTGTTGCCTTCAAAATTGGAGGATGTTCTCAACTTCGGGAATCCTTCAGAGGTTTCGTTCAGAGCCCTTCAGCAGCCAATGTTCGTCCAACATTACGAACATTGTATTTTGGAAATGGTGGtttgtcagatgaagatcttctcgcaattctctattgtttcccaaaattagaagagttaattgcatcagagaacaattttgtatctctccctgaatgcattaaagaatgtgatcacttaacaagtctcgatgtgagcctttgcggggagcttcaaaagattCCTAAATGTACAAAATTGAGAATTCTTAATGTTCATCATTGTGTGAAACTTGAGCAAATCTCGGACTTGCCATCTACTGTCCAGAAAGTAGATGCAAGATATTGCTTCTCTTTAACTAGAGAGACGTCCGACATGTTATGGCTTCAGGTGGCAAAAGGGATACGTGGATTAGAAGTGGTGATGCCCCAAACCGAGATTCCAGAATGGTTTGACTTGGTTGATAATATTAATGGAGGAAATCCTCGTTTCTGGGCCCGTGGCAAGTTTCCTATCATTGCACTAGCATTGGCCTTCCAAGATGTGAGTGAAAGGGCGAGACAATCTCGCCGTCAACTTGTTGAGCTACACCTACTTATCAACGGTCGATGTGTTCCTCGCAAAGGGTATTACAACTTCAAAATTGCAGCAGATCACGTCTTAATTTGTGACCTACGACTTCTATTCAGTGATAAGGAATGGCTTGGCCTTGATGCGTTTCTCGAGCACGAGTGGAACCTGGTGCGGGTTTCATACGAAGCCCCGTCCACCTTGACGCTAAGTGGTTGGGGAGTCTTTGTGTACGAAGAAGGAGCCAACATGGAAGATGTCCAATTCATGTGTCCCGATCCCAAGTATTCGGACATGTCTCCGACAAAATTAGTTCCAACGACGAAAGATCCTAGGCAGGAACGAAAAAAGATGATAGACAATTTATGCCTAGACGAAATGTTTGATGGGATGTTGATGGAAACCATGGACTACGAAGAAAGAGACGATTTTGCTGATAAAGATTTTGCAATAGAGCAAATGCATATTCTAATGGGAGGATTAAAGGACTTATCCACGCAAGCTAAGGATGAATTGGAATCCAATGGCTCAGCTTTACAAGATAATAATAAAAACTCCACCCTAACTTGGTTGCTAGATACAATCAAGAAAATAGATAATGGAGAAGCTGAGCCTCAAAGCTTTTACCATAAGGATCTCGCATTGATTGAACTAAAGGATAAAGTGAAGCCACCTATGGATGCAGCAGAAGAAGCTTCAACCTCTGGTCATCAGTTGCAAGAAATGATGAGAGAAATATTCTATGATGGAATAACTGATGGACTTCTTGAAGCACAGAATATATTTCCTTCTCTAGATATTGTTAAAATCAGAAGTGCTGCCATGAACAAGGGCAATAGGGTTGCATGGTCAGCCGAAGGGAATGTGATACTACCCACGGTTGAAATGAGGACATACACGAGTGGAGTTCTCGGTGGACTCGTTGAAGCAAAGGAGGTATGCTTTCCTGATTTGGACATATGGGCAACACTAAATACTGTGGTAAGTAGGAGAGGCATTCAAGCATCTTTCGCAGCACCACCTACGGTTCCACAATTGGATTGGACCACAATCGTACCTCCTTCGTCACGCTCTCAGGATCCTTTGTTGGAAGCATTCCTGATGATGAAGCCTGAAAGCTCAGAGTCTGAGGCCAAGAGTAAACTCTTCTGGAAGTTCAATGAGGAACACCAAGCTCTACGGAACAAATATGTACAACTTGAAAATGAAAATGCTGCTCCGGATAAAGATATAAGTGACACAGCCAGCAGCCCTTGGAAAAATCAATATGAAGAATTGATTCAGAAATTCAACACTCAATCCGATGATGAGTTTATTGCAAAGAAGCATGACATTATTGCCTGCAAATGTGACACAGAGTATGAGAAGGTGTGTGCTGTTTTGAAAGGAAGAGCTGAAGAATTAGGGAAGCTATACAATGCTGGGATTGAAGGCTTCCAGAACTCACAGGAGTTTCAGGATCTGATAAGTGCAATATACTTGAGTGGACTTAGGGATGGACTCCTTGAAGCACAAGCCGTCTTACTTGCTCTCAACATGGACAGAAAAACTCCAGTGTTTAAGGAGAAAGAGGAGGAACATGTTATTGATCATGATGTTGCCGTTAATGAAAGCGCCATTGTAGCGGATATTCCAATCCCTATAGGTCCAGATGTTGACAATCCCATTCGTGACACTGATAACCCTTCCAGCTCAAAGGATTTTTTCAATTGGCAGGAATTTATTTAA	4647	0.2376	MANHKDESLGFTFTYDVFLSFRGEDTRHKFIGHLRKELCQKGIKVFSDDKDLRIGEGISPALSSAIEKSKILIVVFSENYAESTWCLDELVKILECTKIIIRDKKQLVFPIFYHVDPSDIRHQKKSYGEHMLEHQKRFGKDSQRVQAWRSALSEASNFPGHHISTGYETEFIEKIADKVYKHIAPNPLHTGQNPIGLWPRMEEVMSLLDMKPYDETVRMLGVWGLPGVGKTELATALYNNIVNHFDAASFLSNVREKSNKINGLEDLQKTLLSEMREELDTDLGCANKGMSEIKRKLEGKKVLLVLDDVDDKDKLEKLAGGRDWFGSGSRIIITTRDKDVLIAHQVDNIYQMEELDKHHSLELFCWNAFKQSHPKTGFEDVSLRAIDVAKGLPLALKVIGSDLATLDEESLEDWKCALEEYERTPPERILEVLKKSYDRLGSKPKQVFLDIACFFKGEKKEYVENVLDEDFGAKSNIKVLVNKSLLTIEDGCLKMHDLIQDMGRDIVRQEAPNPGECSRVWYHEDVIDILTDDLGSDKIQGIMLDPPQREEVDWNGTAFDKMKRLRILIVRNTSFLSEPQHLPNHLRVLDWEEYPSKSFPSKFHPKKIIVINLRRSHLTLEEPFKKFACLTNMDFSYNQSITEMPDASEVQNLRELRLDHCRNLIAIHQTVGFLKRLAHLSASNCTKLRNFLQTMFLPSLEVLDLNLCVRLEHFPEIMKEMNKPLKIYMINTAIKELPESIGNLTGLVCIEIPSSRKLKYLPSSLFMLPNVVAFKIGGCSQLRESFRGFVQSPSAANVRPTLRTLYFGNGGLSDEDLLAILYCFPKLEELIASENNFVSLPECIKECDHLTSLDVSLCGELQKIPKCTKLRILNVHHCVKLEQISDLPSTVQKVDARYCFSLTRETSDMLWLQVAKGIRGLEVVMPQTEIPEWFDLVDNINGGNPRFWARGKFPIIALALAFQDVSERARQSRRQLVELHLLINGRCVPRKGYYNFKIAADHVLICDLRLLFSDKEWLGLDAFLEHEWNLVRVSYEAPSTLTLSGWGVFVYEEGANMEDVQFMCPDPKYSDMSPTKLVPTTKDPRQERKKMIDNLCLDEMFDGMLMETMDYEERDDFADKDFAIEQMHILMGGLKDLSTQAKDELESNGSALQDNNKNSTLTWLLDTIKKIDNGEAEPQSFYHKDLALIELKDKVKPPMDAAEEASTSGHQLQEMMREIFYDGITDGLLEAQNIFPSLDIVKIRSAAMNKGNRVAWSAEGNVILPTVEMRTYTSGVLGGLVEAKEVCFPDLDIWATLNTVVSRRGIQASFAAPPTVPQLDWTTIVPPSSRSQDPLLEAFLMMKPESSESEAKSKLFWKFNEEHQALRNKYVQLENENAAPDKDISDTASSPWKNQYEELIQKFNTQSDDEFIAKKHDIIACKCDTEYEKVCAVLKGRAEELGKLYNAGIEGFQNSQEFQDLISAIYLSGLRDGLLEAQAVLLALNMDRKTPVFKEKEEEHVIDHDVAVNESAIVADIPIPIGPDVDNPIRDTDNPSSSKDFFNWQEFI	1548

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma02g02666	1548	Coils	Coil	1356	1376	-	-
	Gma02g02666	1548	PRINTS	Disease resistance protein signature	219	234	-	-
	Gma02g02666	1548	PRINTS	Disease resistance protein signature	296	310	-	-
	Gma02g02666	1548	PRINTS	Disease resistance protein signature	389	403	-	-
	Gma02g02666	1548	PRINTS	Disease resistance protein signature	695	711	-	-
	Gma02g02666	1548	Pfam	TIR domain	15	181	IPR000157	GO:0007165
	Gma02g02666	1548	SMART	till_3	14	158	IPR000157	GO:0007165
	Gma02g02666	1548	Pfam	NB-ARC domain	202	438	IPR002182	GO:0043531
	Gma02g02666	1548	Gene3D	-	12	190	IPR035897	-
	Gma02g02666	1548	SUPERFAMILY	Toll/Interleukin receptor TIR domain	6	160	IPR035897	-
	Gma02g02666	1548	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	21	858	-	-
	Gma02g02666	1548	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	21	858	IPR044974	GO:0006952
	Gma02g02666	1548	Gene3D	-	191	349	IPR027417	-
	Gma02g02666	1548	Gene3D	Ribonuclease Inhibitor	727	909	IPR032675	-
	Gma02g02666	1548	Gene3D	Ribonuclease Inhibitor	553	726	IPR032675	-
	Gma02g02666	1548	ProSiteProfiles	TIR domain profile.	13	183	IPR000157	GO:0007165
	Gma02g02666	1548	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	189	451	IPR027417	-
	Gma02g02666	1548	Gene3D	-	354	441	IPR042197	-
	Gma02g02666	1548	SUPERFAMILY	L domain-like	494	886	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma02g02666	Gma-Chr2	52523471	52530919	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma02g02666	15	782	WRKY Transcription Factor Family	AT4G12020	31.305	1.72e-96	343

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma02g02666	-		-	gmx:121173506	3070.03