Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02645 ATGAACGAACGTGGTGGATATATCACTGGATCAGAACGAAGGAAAAAGGACTCTAAAGTTATAAGAGCACTTGCTCTGTTTTGTTTCTACTTTCTAGTACTCTTTACATTAGCTGGTGAAAGCATTGAACTGGTAGTGATGGTATGTCTTGAACTTGTAATTGGTGTTGGTGGCCCTAAAGTTGCAATTGATGTGGACGGTCCTGcctttggtggtcctgaagttgtaattagtgttggcaaccttacctttggcagtcctgaagctgtaattggtgttggcggctctgcctttggtggtcctgaaattgtaattggtgttggTGGCCCTGAAGTTGTAATTAGGGCCTTTGGTGGCCTTGCCTTTGGCGGTCCTGAACTTGTAATTGGTATTGGTGTTGGGGATTCTACCTTTAGTGGTCTTGAAGTTGTAATTGGTGCCCTTGACGATCCTGTCTTTGGCGGTCCTAAAATTGTAATTGGTGTTGGCAACCTTGCCTttggtggtcctgaagttgtatttgTTTTTGCTAAGTTTGGAACTTCACCTATTGTTATAGCTCCAAGCATGAAGCTCTCTTCTTCTGGATTTAATCCTCCGGCTGAAGAAGAAGGGGAGAAAAAATGTTTGAATTCTGAACTTTGGCATGCTTGTGCTGGCCCTCTGGTTTCTCTGCCTCCGGTTGGAAGTCGTGTAGTCTACTTTCCCCAAGGTCATAGTGAGCAGGTTGCTGCATCAACCAACAGGGAAGTAGATGCACATATTCCTAATTACCCCAACTTGCCACCACAACTTATCTGTCAGCTTCACAATGTGACAATGCATGCAGATGCTGAAACAGATGAAGTATATGCTCAAATGACTCTGCAACCTCTAAGTCCACAAGAGCAAAAGGAGGTGTATCTGCTGCCTGCCGAATTGGGTACTCCCAGCAAGCAACCAACCAACTACTTTTGCAAAACATTGACTGCAAGTGATACCAGCACTCATGGAGGATTTTCTGTTCCTCGAAGAGCAGCTGAAAAAGTCTTCCCTCCTCTTGATTACTCACAGCAGCCTCCTGCTCAAGAACTAATTGCCAGAGATCTTCATGATAATGAATGGAAATTCAGGCATATATTTCGCGGTCAGCCCAAAAGGCATCTTCTTACTACAGGGTGGAGTGTCTTTGTCAGTGCCAAGAGGCTTGTTGCTGGTGATTCAGTCCTTTTCATCTGGAATGAAAAAAACCAGTTACTCTTGGGCATACGGCGAGCGAATCGTCCGCAGACTATCATGCCATCGTCGGTTTTGTCAAGTGATAGCATGCACATTGGTCTTCTTGCTGCTGCAGCTCATGCAGCTGCCACTAACAGCCGCTTTACTATATTCTATAATCCTAGGGCAAGCCCATCTGAATTTGCCATTCCGTTGGCCAAGTACGTTAAAGCTGTGTATCATACACGAGTTTCTGTTGGCATGCGATTTAGGATGCTCTTTGAGACAGAAGAATCAAGTGTTCGTCGATACATGGGTACCATAACTGGTATTAGTGATTTAGATCCGGTCCGCTGGCCAAATTCACACTGGCGTTCTGTGAAGGTTGGCTGGGATGAGTCTACTGCAGGGGAGAGGCAGCCAAGAGTTTCCTTGTGGGAGATTGAACCTTTGACAACATTCCCAATGTATCCGTCTCCATTCCCCTTAAGGTTGAAGCGCCCATGGCCATCAGGCTTACCTTCTTTATATGGTCTCAAGGATGGAGACATGGGCATTGGTTCTCCATTCATGTGGCTCCAAGGTGGGCTTGGGGATCAAGGAATGCAATCTTTAAACTTCCAGGGGCTTGGTGTTACACCATGGATGCAACCTAGACTTGATCCTTCTATACCAGGTCTCCAGCCAGAGTTATACCAAGCAATTACTTCTTCTGCATTCCAGGAAATGAGGACAATGGATCTTTCAAAATCTTCGCAATCTCTTTTGCAGTTTCAGCAGACTTCAAATGTTCCCAGTGCTCATGCTTCTGAGGTACAGAGGCAATTGTTACCACAGTCTCAGCTTCAAAACACCCTTCTACACAATTTTCAAGAAAACCAGGTGCCTGCTCAGTCacaacttctgcaacagcagttgcatcgttaccacccgtatagtgatcagcagcaacagcagcagcaacttaaaaacttgcctgttcagcagcagTTACCAAATGTCATCTCTCCTATGTCTAAGTTTGCATCAGGTACCCAGTCTCAATCTCCTCCCATGCAAGCCCTAGCTTCACATTGTCAGCAGCAGAGCTTTCCTGAACCTATGAGGAATCATATTTCCGGTTCTGATGTTTCCCCTATCCAGAGTCTACTAGGGTCATTCTCCCAGGATGGAACATCCCAGTTACTTAACTTGAGTGGATCCAATTCTGTTATGTCTTCTGCTGCCATACTGCCCAAGCAAATAACTGCCGAGCCTCCTCAGCTTCCATCTGCTGCTTCTCAGTGCATATTGCCTCAGGTGGAAAACTTGGGAACATCACAATCAAATGTGTCTGAACTTGCTGCTTTGCCTCCATTTCCTGGAAGAGAACATTCTGCATACCATGGCGCTGCTGATCCTCAGAGCAATATTTTATTTGGGATTAACATTGATCCCTCTTCTCTTATGCTGCAAAGTGGCATGTCAAACCTGAGAAATATAGGCAAAGTGAACGATTCATTATCGTTGCCATTTTCTACTTCGAATTGTGGTGGTGCTACAGGCACTGATTTCCCCTTGAGTTCAAACATGACAACTTCAAGTTGTGTGGATGAATCAGGCTTCTTGCAGTGTTCTGAAAATGTAGACCAAGCAAATATACCAACTGGAACCTTTGTTAAGGTTCACAAGTCAGGGTCCTTTGGCAGGTCACTGGACATTTCTAAGTTCAGCAGCTATGATGAACTGATTAGTGAGCTTGCTCGCATGTTTGGCCTTGAAGGCCAACTAGAGGACCCTAAGACTCAGAGATCAGGCTGGCAGCTTGTATTTGTTGACCGGGAGAATGATGTTCTTCTTCTTGGTGATGATCCTTGGCAGGAGTTTGTGAACAATGTGTGGTACATAAAAATACTATCTCCACTAGAAGTGCAACAAATGGGCAAAGTTCTTAGTCCTTCTACTTCTGCCCCAGGTGACAAACTTTCTACTCCTGTCAACTCCTGTGATAATTATGTGAGTCAACAAGAGTTGAGAAGTTCGAGAAACGGCATGGCATCAATGGGGTCTTTTCACTACTAG 3258 0.4168 MNERGGYITGSERRKKDSKVIRALALFCFYFLVLFTLAGESIELVVMVCLELVIGVGGPKVAIDVDGPAFGGPEVVISVGNLTFGSPEAVIGVGGSAFGGPEIVIGVGGPEVVIRAFGGLAFGGPELVIGIGVGDSTFSGLEVVIGALDDPVFGGPKIVIGVGNLAFGGPEVVFVFAKFGTSPIVIAPSMKLSSSGFNPPAEEEGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFAIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPSGLPSLYGLKDGDMGIGSPFMWLQGGLGDQGMQSLNFQGLGVTPWMQPRLDPSIPGLQPELYQAITSSAFQEMRTMDLSKSSQSLLQFQQTSNVPSAHASEVQRQLLPQSQLQNTLLHNFQENQVPAQSQLLQQQLHRYHPYSDQQQQQQQLKNLPVQQQLPNVISPMSKFASGTQSQSPPMQALASHCQQQSFPEPMRNHISGSDVSPIQSLLGSFSQDGTSQLLNLSGSNSVMSSAAILPKQITAEPPQLPSAASQCILPQVENLGTSQSNVSELAALPPFPGREHSAYHGAADPQSNILFGINIDPSSLMLQSGMSNLRNIGKVNDSLSLPFSTSNCGGATGTDFPLSSNMTTSSCVDESGFLQCSENVDQANIPTGTFVKVHKSGSFGRSLDISKFSSYDELISELARMFGLEGQLEDPKTQRSGWQLVFVDRENDVLLLGDDPWQEFVNNVWYIKILSPLEVQQMGKVLSPSTSAPGDKLSTPVNSCDNYVSQQELRSSRNGMASMGSFHY 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02645 1085 Pfam Auxin response factor 444 527 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Gma02g02645 1085 SMART B3_2 318 420 IPR003340 GO:0003677
Gma02g02645 1085 SUPERFAMILY CAD & PB1 domains 941 1025 - -
Gma02g02645 1085 Pfam B3 DNA binding domain 318 419 IPR003340 GO:0003677
Gma02g02645 1085 SUPERFAMILY DNA-binding pseudobarrel domain 303 447 IPR015300 -
Gma02g02645 1085 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 190 1061 IPR044835 GO:0003677|GO:0006355|GO:0009725
Gma02g02645 1085 Gene3D - 946 1040 - -
Gma02g02645 1085 ProSiteProfiles PB1 domain profile. 949 1035 IPR000270 GO:0005515
Gma02g02645 1085 PANTHER AUXIN RESPONSE FACTOR 6 190 1061 - -
Gma02g02645 1085 Pfam AUX/IAA family 941 1033 IPR033389 -
Gma02g02645 1085 Gene3D - 316 419 IPR015300 -
Gma02g02645 1085 ProSiteProfiles B3 DNA-binding domain profile. 318 420 IPR003340 GO:0003677
Gma02g02645 1085 CDD B3_DNA 317 418 IPR003340 GO:0003677
Gma02g02645 1085 Gene3D - 482 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02645 Gma-Chr2 52359159 52374179 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02645 287 1040 B3 DNA Binding Superfamily AT5G37020 55.204 0.0 683
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Gma02g02645 AUX_IAA 5.5e-08 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00287 14 2434057 2443142 Gma02g02645 02 52359159 52374179 GST