Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02641 ATGTTAACCGCAGTCCTCAGAAGAACCAGTTCCACCCTCTCAAGGCGCGGTTTCCCCGCCGCCTTAATCTCTGCCTCCACCGCCACCGCCGGCAACCACTTCCGGCTACTCTCCGCTGCCGTCAATTCCAGAACCTTCCACTCCAACCCTGGCCCCTTGAATTTCCGCGCCTCTTCATGTCACCGCGCGGAATACGCCGTGGACGATTTCCCTTACGAAGAAGGGTCCAAAGGAAACGCCGACGAAGGCCTCGAGATCGCGAAGCTCGGAATTTCGCAGGATATTGTCTCCGCTTTGGCCAAGAAAGGCATCACCAAGCTCTTCCCCATTCAGAGGGCTGTGTTGGAACCTGCTATGCAAGGTCGTGATATGATTGGTCGAGCTAGAACTGGAACTGGGAAGACTCTTGCTTTTGGGATACCCATCATGGATAAGGTCATTCAGTTTAATGCTAAGCATGGGCGGGGGAGGGATCCTTTGGCTTTGGTGTTGGCTCCGACCAGAGAGCTTGCGCGACAGGTTGAATCAGAGTTCTGTGAGTCGGCACCTAATTTGGATACAATTTGTGTTTATGGGGGTACACCCATTTCTCAGCAGATGAGGCAGCTTGATTATGGGGTTGATATTGCTGTGGGGACGCCTGGTCGGATTATTGACCTTCTCAACAGAGGTGCGCTAAATTTGAAGGATGTTCAGTTTGTTGTTCTTGATGAAGCTGATCAGATGCTTCAGGTGGGCTTTCAGGAAGACGTGGAGAAGATCTTGGAGAGGTTGCCCCCAAAACGTCAGACTCTTATGTTCTCTGCAACAATGCCATCTTGGATAAAGCAGATTTCGCGCAATTACTTGAATAATCCCCTAACCATTGATCTTGTTGGAGATTCTGATCAGAAATTGGCAGATGGAATTTCACTGTACTCCATTGCAACTGATTTGTATGTTAAAGCGGGAATTCTTGCACCTCTAATAACAGAACATGCAAAAGGAGGAAAGTGTATTGTTTTCACTCAAACAAAACGTGATGCTGATCGATTATCGTATGCCATGGCAAGAAGTGTTAAATGTGAGGCTTTGCATGGAGACATATCACAAGCTCAAAGGGAGAAAACTCTTGCTGGCTTCAGAAATGGCCATTTTAATGTTTTAGTGGCAACTGATGTTGCCTCACGTGGGCTTGATATACCTAATGTTGATCTTGTAATACATTATGATCTTCCCAACAATTCAGAGATATTTGTTCATCGTTCTGGACGAACAGGTCGTGCTGGTAAGAAAGGAACTGCAATTCTTGTGTATACAGAAGATCAATCGAGGGCTGTTAAGCTTATAGAGCGTGATGTAGGCAGTAGATTTTCAGAGCTGCCACGGATTGCTGTTGATAGTGCATCAGCGGTCATGGTTGATGGCATGGGTGGCGGGCGATTTGGTTCTTTTGGAGGTAACAGGGATCGTCGATACGGTGATATGGGTTTTGGATCTGGCCATTCTGGGGGTTACAGTAACCCTGGTTCTGGCCGCTCTAGCTTTGGAAATTCCGGTGAAAGGTTTGGTGGACAGAATTATAATCGTTTTGGCTCATCTGGTGGCTTTGGTTCTGGTCAATCAGGAAGTAGATCTGGTGGATCATCCAGCAGGTCTAGGTTTAGTCGCTCAGATGATTTTGGGGGATTTGGTGGTTCAGATCGTTCGGGTGGTTTTGGAGATTTTGGCTCAGGTCAGTCTAGTGGCTTCGGTGGTTCTCGTGGTAGTAAGCAGAACAATAGAAGACCTTTTTAA 1776 0.4747 MLTAVLRRTSSTLSRRGFPAALISASTATAGNHFRLLSAAVNSRTFHSNPGPLNFRASSCHRAEYAVDDFPYEEGSKGNADEGLEIAKLGISQDIVSALAKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKVIQFNAKHGRGRDPLALVLAPTRELARQVESEFCESAPNLDTICVYGGTPISQQMRQLDYGVDIAVGTPGRIIDLLNRGALNLKDVQFVVLDEADQMLQVGFQEDVEKILERLPPKRQTLMFSATMPSWIKQISRNYLNNPLTIDLVGDSDQKLADGISLYSIATDLYVKAGILAPLITEHAKGGKCIVFTQTKRDADRLSYAMARSVKCEALHGDISQAQREKTLAGFRNGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVYTEDQSRAVKLIERDVGSRFSELPRIAVDSASAVMVDGMGGGRFGSFGGNRDRRYGDMGFGSGHSGGYSNPGSGRSSFGNSGERFGGQNYNRFGSSGGFGSGQSGSRSGGSSSRSRFSRSDDFGGFGGSDRSGGFGDFGSGQSSGFGGSRGSKQNNRRPF 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02641 591 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 84 112 IPR014014 GO:0003724
Gma02g02641 591 CDD DEADc 95 290 - -
Gma02g02641 591 SMART helicmild6 343 423 IPR001650 -
Gma02g02641 591 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 115 289 IPR014001 -
Gma02g02641 591 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 53-LIKE 36 509 - -
Gma02g02641 591 MobiDBLite consensus disorder prediction 497 550 - -
Gma02g02641 591 Pfam Helicase conserved C-terminal domain 318 423 IPR001650 -
Gma02g02641 591 MobiDBLite consensus disorder prediction 493 591 - -
Gma02g02641 591 Pfam DEAD/DEAH box helicase 108 277 IPR011545 GO:0003676|GO:0005524
Gma02g02641 591 SMART ultradead3 103 306 IPR014001 -
Gma02g02641 591 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 318 462 IPR001650 -
Gma02g02641 591 Gene3D - 308 463 IPR027417 -
Gma02g02641 591 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 444 IPR027417 -
Gma02g02641 591 MobiDBLite consensus disorder prediction 567 591 - -
Gma02g02641 591 Gene3D - 85 293 IPR027417 -
Gma02g02641 591 CDD SF2_C_DEAD 315 432 - -
Gma02g02641 591 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 36 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02641 Gma-Chr2 52327371 52332310 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02641 89 455 Eukaryotic Initiation Factors Gene Family AT3G19760 33.423 9.01e-68 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02641 - - gmx:100778436 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00292 14 2486777 2491411 Gma02g02641 02 52327371 52332310 GST