Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02628 ATGGAAGaatcaagtgaattgcaatcagaagaaaataaagtctccaatgagaaaaataagaaaagaaagctgaaaacaccggcgcagcttaaagccttggaggatttttataatgagcacaaataccccacggaggaaatgaaattagtacttgctgaggagttaggattgacagaaaagcaaatatctggatggttttgccacagaaggttaaaagataaaagattgatgaaagatgaagccgttgctaatgggagacaagatcgttcaagtggtgtcatccaagatcgtggcagtggacttgggcaagattcatgcggaagcagtaagcatgctgatcacaggtatctggatccgaaggaggttgagagccatggcctctacaatcacgaattgtcagttgcagatatgacccacagacgtaggaaccattatcctgaaaatgttagtggggtggatgacacatcatctgagagcagctcatttttgcaagaaaggttttctcaaggtcaggatccgtatgatatggagccttctagacatcttacacctaatggagctcttccacccctaaatcccaaaggtgcagttaacatggggcacaaaccatcaggatatttgaaagtgaagggcgagatagaacatgctgctataactgctgttagaaagcaattaggaaggcattatctggaagatggtccactacttggtatagaattcgatccgcttcctccaggggcatttgaatgccaaactgcagatacagctaatgaaccgtactctgttgcaaatcctctgctttcgaattctccagaaatctttgctgcaaaaagacaactcagtcttagctctGATAAACAAGATAAGAAAGCATGTCAGAACATAAAACAAAGGCAATCTTTATACGGTTATACCAATAATTTTCCTGGAAGGAACACTTTCCCAGATTTGTATGAAGACTCTACTGGAGAAGCATCTGCTTATAATAGCAATAAGAGTCATAGAATGAGCACTAAACATGGTGTTGAGGGGATGCGATCTGATTCTGCTTCTAACCATAGTGATCACTATGAAGAGAAGCTTACAGTTAAGCAGAAAACCTTGATGCTGCATGGTTATGATAACATCAATCCAAAGAATATACAAAGGAGTGAACATGTAAAATCTAAACCTTCTAGTTCAATCCATAATTCCCGTGTTCCTATGGATACTGAAGAACGGGGGTTATCTGCTAGGATGGCAAAGGAAGAGATGTTTAAGGGGAACAGGAAAGCAAAAAATACATACTGCGATGTAGAGGGAGCAGGGATGCTTTCAAATGAAATCATGGTTGCAAAACGAGCTAAAGTTGACATGCTTCAACAATACAATGTGAAAAAATCACCTGTTGCTGAGATGGAACTAAAGAAAATTCAGAGATCTGTTGCAGAGATGCCTTCTAGCTTTAGCGAGGATGAAACTGCTGACACCAGTTCCTCACTGGATTATTAA 1491 0.1663 MEESSELQSEENKVSNEKNKKRKLKTPAQLKALEDFYNEHKYPTEEMKLVLAEELGLTEKQISGWFCHRRLKDKRLMKDEAVANGRQDRSSGVIQDRGSGLGQDSCGSSKHADHRYLDPKEVESHGLYNHELSVADMTHRRRNHYPENVSGVDDTSSESSSFLQERFSQGQDPYDMEPSRHLTPNGALPPLNPKGAVNMGHKPSGYLKVKGEIEHAAITAVRKQLGRHYLEDGPLLGIEFDPLPPGAFECQTADTANEPYSVANPLLSNSPEIFAAKRQLSLSSDKQDKKACQNIKQRQSLYGYTNNFPGRNTFPDLYEDSTGEASAYNSNKSHRMSTKHGVEGMRSDSASNHSDHYEEKLTVKQKTLMLHGYDNINPKNIQRSEHVKSKPSSSIHNSRVPMDTEERGLSARMAKEEMFKGNRKAKNTYCDVEGAGMLSNEIMVAKRAKVDMLQQYNVKKSPVAEMELKKIQRSVAEMPSSFSEDETADTSSSLDY 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02628 496 MobiDBLite consensus disorder prediction 7 30 - -
Gma02g02628 496 MobiDBLite consensus disorder prediction 149 168 - -
Gma02g02628 496 MobiDBLite consensus disorder prediction 1 30 - -
Gma02g02628 496 Gene3D - 8 92 - -
Gma02g02628 496 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 284 - -
Gma02g02628 496 MobiDBLite consensus disorder prediction 476 496 - -
Gma02g02628 496 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 280 495 - -
Gma02g02628 496 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Gma02g02628 496 MobiDBLite consensus disorder prediction 144 178 - -
Gma02g02628 496 MobiDBLite consensus disorder prediction 474 496 - -
Gma02g02628 496 CDD homeodomain 20 75 IPR001356 GO:0003677
Gma02g02628 496 SMART HOX_1 18 80 IPR001356 GO:0003677
Gma02g02628 496 MobiDBLite consensus disorder prediction 82 113 - -
Gma02g02628 496 SUPERFAMILY Homeodomain-like 18 83 IPR009057 -
Gma02g02628 496 MobiDBLite consensus disorder prediction 323 354 - -
Gma02g02628 496 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 284 - -
Gma02g02628 496 MobiDBLite consensus disorder prediction 88 106 - -
Gma02g02628 496 Pfam Homeodomain 20 75 IPR001356 GO:0003677
Gma02g02628 496 MobiDBLite consensus disorder prediction 384 408 - -
Gma02g02628 496 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 280 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02628 Gma-Chr2 52224791 52230488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02628 3 495 Homeobox Transcription Factor Family AT4G03250 39.439 5.04e-88 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Gma02g02628 Homeodomain 2.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02628 - - gmx:100805913 946.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02628 02 52224791 52230488 Gma02g02628 02 52224791 52230488 ECH
Gma14g00297 14 2578130 2583874 Gma02g02628 02 52224791 52230488 GST