Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02623 ATGGAGAATAGTGTCCATGAACCCTTCTTTTGCCTACCTTCTCAGAATGGCTCCACGAGCAACAATTCCACTAATTTTACCACCCTCTTTGAAAGCTCCCATGTTGTTGGTTTCAACAAAAGTCATTTATCCTTTGATAACATCAATAGTAGCAATAACTTTCTCGAACCCATAGTCCTAATTGTTCCTCCTGGAATTGACATTGTTAATGCCATCATCAACTTTAGTCATGATCAAGATGTGGACATTTCGGTGCATCATGCTTCAGGTCTCATATGTGAAATAAACCTTTGCAACCCTCTCTCCACTTCCGATGATTTGTGCTTCTTGGGAACCTTTCACATGATTTCTCTCACAGGCTTTTACACCAACAACAACCTTTCAGCTTCTTCACCCCCCAACAACATTCCCTATCCATCCTTCGCAATTCAATTCACGAGAGGAAGCCCTCCCAAACTCTTTGGAGGCCGTATTGGAGGCAAGCTCATTGGTGTAGAACCTGTGCATGTAATGGCTTCTATCGTTAAGAAGCATGAGTACCATAAGCCAAATGTTCAGCCTGTCATCAAAAGTACTCGTGGTGCTAATCACTATGTTGACATCACCAACAACACTGACAATAATCACCTTGGTTTCTCTAATATTGGACCTTCAAGCTCATCTCCGATCAATATCCAAACCACTACTACTCCTTATGCTCCTACAGATGCTAACATGCATGCTCTATCTGAACAACCCCACCAATCAGGATAA 753 0.421 MENSVHEPFFCLPSQNGSTSNNSTNFTTLFESSHVVGFNKSHLSFDNINSSNNFLEPIVLIVPPGIDIVNAIINFSHDQDVDISVHHASGLICEINLCNPLSTSDDLCFLGTFHMISLTGFYTNNNLSASSPPNNIPYPSFAIQFTRGSPPKLFGGRIGGKLIGVEPVHVMASIVKKHEYHKPNVQPVIKSTRGANHYVDITNNTDNNHLGFSNIGPSSSSPINIQTTTTPYAPTDANMHALSEQPHQSG 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02623 250 Pfam Plants and Prokaryotes Conserved (PCC) domain 57 173 IPR005175 -
Gma02g02623 250 SUPERFAMILY AF0104/ALDC/Ptd012-like 54 181 - -
Gma02g02623 250 ProSiteProfiles PPC domain profile profile. 52 195 IPR005175 -
Gma02g02623 250 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 47 216 IPR014476 GO:0003680
Gma02g02623 250 MobiDBLite consensus disorder prediction 215 250 - -
Gma02g02623 250 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 47 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02623 Gma-Chr2 52163425 52164177 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02623 57 171 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 28.696 2.02e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02623 - K12182 ccaj:109801644 147.517