Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02615 ATGTCAATGTTGAGATCAGTTTGTCAGTTAAGGGTGGGAGTCACAACCCAAAAACCTTGCCTCCATCCCTCAATCTTATTCTCCTTTTCCCTCTCTCACAACACTCACACTCTCACTCTCACATCTTTCCCCAGAACCTTCCGTTTCCACCCACCTTCACTGCCTCTTTCACCCTTTGTGCCCTTCATGCCTCCCAAAGCAACAGCTTCGTATGGCACTGGGGCTAGTGCTGCTGCTGAAGGTGATAGGCCAAGGGAGATATTGGTGCAGCATTTGTTGGTCAAAGAAGATGACCAGAAGCTTCTGTTAGATATTCAGCAAAGAATCTCTTCAGGTGAAGATTTGAGTGATCTTGCTGTGGAATATTCACTGTGCCCATCCAAAGAAGAAGGAGGGATGCTTGGGTGGGTCAGAAAGGGACAAATGGTTCCTGAATTTGAGGAGGCTGCATTTACTGCACCTTTAAACAAAGTGGTAAGTTGCAAAACGAAATTTGGATGGCACCTGCTTCAGGTTTTATCTGAAAGGGAAGAATCAATTCTTCAAGACATTCAACCTGATGAGCTGCATGTGAAAATTCAAGATCCCAGCTTTTTTGACGGGGCACAGTTAATTGATGTGCGAGAGCCTGAAGAAGTGGCCAAAGCATCTTTGCCAGGATTTACCGTTCTTCCCCTCCGACAATTTGGAAGCTGGGGGCCTGAAATAACTACCAAATTTGACCCTCAAAAGGATACTTATGTTCTGTGTCATCATGGCATGCGGTCATTACAAGTTGCCAAGTGGTTGCAGTCACAGGGTTTTAGGAAAGTATACAATCTTTCTGGGGGAATCCATGCCTATGCTGTCCAGGTTGATCCATCAGTTCCCACATATTGA 879 0.4551 MSMLRSVCQLRVGVTTQKPCLHPSILFSFSLSHNTHTLTLTSFPRTFRFHPPSLPLSPFVPFMPPKATASYGTGASAAAEGDRPREILVQHLLVKEDDQKLLLDIQQRISSGEDLSDLAVEYSLCPSKEEGGMLGWVRKGQMVPEFEEAAFTAPLNKVVSCKTKFGWHLLQVLSEREESILQDIQPDELHVKIQDPSFFDGAQLIDVREPEEVAKASLPGFTVLPLRQFGSWGPEITTKFDPQKDTYVLCHHGMRSLQVAKWLQSQGFRKVYNLSGGIHAYAVQVDPSVPTY 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02615 292 Gene3D - 178 289 IPR036873 -
Gma02g02615 292 Gene3D - 83 177 IPR046357 GO:0003755
Gma02g02615 292 Pfam PPIC-type PPIASE domain 88 174 - -
Gma02g02615 292 Pfam Rhodanese-like domain 199 282 IPR001763 -
Gma02g02615 292 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 6 292 - -
Gma02g02615 292 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 180 290 IPR036873 -
Gma02g02615 292 CDD RHOD_2 183 286 - -
Gma02g02615 292 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 84 174 IPR000297 GO:0003755
Gma02g02615 292 ProSiteProfiles Rhodanese domain profile. 198 290 IPR001763 -
Gma02g02615 292 SMART rhod_4 184 287 IPR001763 -
Gma02g02615 292 SUPERFAMILY FKBP-like 83 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02615 Gma-Chr2 52084792 52088433 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02615 85 292 Sulfurtransferasese or Rhodanese AT5G19370 66.827 2.62e-103 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02615 - - gmx:100803404 568.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02615 02 52084792 52088433 Gma02g02615 02 52084792 52088433 ECH
Gma14g00311 14 2732988 2736310 Gma02g02615 02 52084792 52088433 GST