Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02614 ATGGGCAATTGTTGCTCAGGTGGCACCAATGACACTGAGGACAAAAGAGAAACCAACCAACCAACCAGTGACAACGGAGGCGGAGGCGCGACTGCAACCGCAACCGCAACCGCAGCCGCCACCACCCCGCCACCATCATCTAAGGCCAAGCAGTCGAAGCCGGCTGCGATCGGGCCGGTGCTCGGAAGGGCGATGGAGGACGTGAAAAGCACTTATAGCATGGGGAAAGAGCTAGGGAGAGGGCAGTTTGGTGTGACACATTTGTGCACACACAAGAGCACAGGGAAGCAATATGCATGCAAGACCATAGCGAAGAGAAAATTGGTTAACAAGGAGGatatagaggatgttaagagggaggtgcaaatcatgcatcatctctcagggcaagctaacattgtggaacttgttaatgtgtatgaggacaagcaatctgttcatttggtgatggagttgtgtgcaggcggcgaactctttgatcgcatcattgcaaagggacattacactgaacgtgctgcggcttcattgttgagaaccattgtgcagattgttcacacttgccattccatgggagtcattcatagagatcttaagcctgagaatttccttctcttgaacaaggatgagaatgcacccctcaaggccactgatttcggtctctccgttttttacaagcaagGAGAGATGTTTAAGGACATTGTTGGCAGTGCATATTACATTGCACCCGAGGTCTTAAAAAGAAAATACGGACCGGAAGTTGACATTTGGAGTATTGGTGTCATGTTATACATTCTTCTATGCGGTGTTCCTCCCTTTTGGGCAGAATCCGAAAATGGGATATTCAATGCAATCCTACGAGGCCATGTTGACTTTACAAGCGATCCATGGCCATCCATTTCACCTGCAGCAAAAGATCTTGTAAGGAAAATGTTGCATTCGGATCCCAGGCAGAGGATGACGGCCTACGAAGTTCTGAATCATCCATGGATCAAGGAGGATGGAGAAGCACCAGATACACCTCTTGACAACGCAGTACTGAATAGGCTCAAACAGTTCAGAGCAATGAACGAATTCAAGAAAGTTGCTCTAAGGGTCATTGCGGGCTGCCTATCAGAGGAAGAAATCATGGGATTGAAGCAGATGTTCAGGGGGATGGATACTGACAACAGTGGAACCATTACAATTGAAGAGCTCAAGCAAGGGCTTGCAAAACAAGGGACTAAACTAACGGAACAAGAAGTTAAGCAATTAATGGAAGCTGCAGATGCTGATGGCAATGGAACCATAGATTACGATGAATTCATTACAGCAACAATGCACATGAACCGAATGAACAAAGAAGATCATCTTTATACTGCTTTCCAATACTTTGATAAAGATAACAGCGGGTACATTACCATTGAAGAACTAGAGCAGGCACTCGTTGAGTTTAACATGCATGATGGCAGGGACATGAAGGAAATCATTTCAGAAGTTGACTCAGATAATGATGGCCGGATTAACTATGATGAGTTTGCTGCAATGATGAACAAAGGAACACTAGAAGTTGGTACCAAGAAGAGGCGTGATTCAACCGTATATTAG 1584 0.3605 MGNCCSGGTNDTEDKRETNQPTSDNGGGGATATATATAAATTPPPSSKAKQSKPAAIGPVLGRAMEDVKSTYSMGKELGRGQFGVTHLCTHKSTGKQYACKTIAKRKLVNKEDIEDVKREVQIMHHLSGQANIVELVNVYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIVHTCHSMGVIHRDLKPENFLLLNKDENAPLKATDFGLSVFYKQGEMFKDIVGSAYYIAPEVLKRKYGPEVDIWSIGVMLYILLCGVPPFWAESENGIFNAILRGHVDFTSDPWPSISPAAKDLVRKMLHSDPRQRMTAYEVLNHPWIKEDGEAPDTPLDNAVLNRLKQFRAMNEFKKVALRVIAGCLSEEEIMGLKQMFRGMDTDNSGTITIEELKQGLAKQGTKLTEQEVKQLMEAADADGNGTIDYDEFITATMHMNRMNKEDHLYTAFQYFDKDNSGYITIEELEQALVEFNMHDGRDMKEIISEVDSDNDGRINYDEFAAMMNKGTLEVGTKKRRDSTVY 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02614 527 ProSiteProfiles EF-hand calcium-binding domain profile. 445 480 IPR002048 GO:0005509
Gma02g02614 527 ProSitePatterns EF-hand calcium-binding domain. 493 505 IPR018247 -
Gma02g02614 527 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 17 518 - -
Gma02g02614 527 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Gma02g02614 527 MobiDBLite consensus disorder prediction 21 49 - -
Gma02g02614 527 ProSitePatterns EF-hand calcium-binding domain. 422 434 IPR018247 -
Gma02g02614 527 ProSiteProfiles EF-hand calcium-binding domain profile. 373 408 IPR002048 GO:0005509
Gma02g02614 527 Gene3D Transferase(Phosphotransferase) domain 1 158 337 - -
Gma02g02614 527 SMART serkin_6 72 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02614 527 Gene3D - 338 513 - -
Gma02g02614 527 MobiDBLite consensus disorder prediction 1 60 - -
Gma02g02614 527 Gene3D Phosphorylase Kinase; domain 1 74 157 - -
Gma02g02614 527 CDD STKc_CAMK 72 329 - -
Gma02g02614 527 ProSitePatterns EF-hand calcium-binding domain. 458 470 IPR018247 -
Gma02g02614 527 ProSiteProfiles EF-hand calcium-binding domain profile. 484 515 IPR002048 GO:0005509
Gma02g02614 527 PANTHER SERINE/THREONINE-PROTEIN KINASE 17 518 - -
Gma02g02614 527 Pfam EF-hand domain pair 448 509 IPR002048 GO:0005509
Gma02g02614 527 Pfam EF-hand domain pair 378 438 IPR002048 GO:0005509
Gma02g02614 527 SUPERFAMILY Protein kinase-like (PK-like) 70 336 IPR011009 -
Gma02g02614 527 SUPERFAMILY EF-hand 370 510 IPR011992 -
Gma02g02614 527 ProSitePatterns Protein kinases ATP-binding region signature. 78 105 IPR017441 GO:0005524
Gma02g02614 527 ProSiteProfiles EF-hand calcium-binding domain profile. 409 444 IPR002048 GO:0005509
Gma02g02614 527 ProSiteProfiles Protein kinase domain profile. 72 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02614 527 Pfam Protein kinase domain 72 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02614 527 SMART efh_1 449 477 IPR002048 GO:0005509
Gma02g02614 527 SMART efh_1 377 405 IPR002048 GO:0005509
Gma02g02614 527 SMART efh_1 484 512 IPR002048 GO:0005509
Gma02g02614 527 SMART efh_1 413 441 IPR002048 GO:0005509
Gma02g02614 527 ProSitePatterns EF-hand calcium-binding domain. 386 398 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02614 Gma-Chr2 52075583 52082297 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02614 1 523 EF-hand Containing Proteins AT5G12180 79.810 0.0 883
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gma02g02614 Pkinase 9.8e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02614 K13412 - gmx:100819061 1024.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02614 02 52075583 52082297 Gma02g02614 02 52075583 52082297 ECH
Gma14g00312 14 2738664 2742493 Gma02g02614 02 52075583 52082297 GST
Gma20g00401 20 7516712 7521838 Gma02g02614 02 52075583 52082297 PCT
Gma02g02614 02 52075583 52082297 Gma20g00401 20 7516712 7521838 PCT