Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02595 ATGAGGAAGAAGCTAGATACTCGTTTCCCTGCGGCTAGGATTAAGAAAATTATGCAAGCTGACGAGGATGTAGGGAAGATTGCAATGGCCGTGCCTCTTCTAGTTTCTAAAGCACTAGAGCTATTTCTGCAAGATTTGTGTGATCGAACATATGATATAACTTTGAGGAGAGGGGCAAAGACTATGAATGCTTTTCATTTAAAACAGTGTGTGCAGACTTTTAATGTCTTTGATTTTCTGAAAGATATTGTCAGCAAGGTTCCTGATTTAGGTGGTTCTGTTGCAACTGGTGATGACCATGCTGTCACTAAGAGGAGGTTTGTGCTCTGGTTAATACTCTTGTTACTTGGAACAAGTTTTCTGTATGCTAAATTTTGTTTATTTTATATTAGGAAAGTTGCTGGAGATGATGATAATGACAGCGATGAGGAGCTCAAGAGAAATAAGAAGCCAGAGCCTGGACATAGCAGTGGCAGAGGAAGGGGTAGAGGCAGAGGTAGGGGTCTTGGCGGTGGAATTAGAACTGTAGATCAAGAGATGAGTTCACATGCCAAGTGTGAAGATGATTCTGATGTCTTGAAGCAGAATGACAACCACACTCAGAGTAATGAAAGCATGGAAAATGTGCTGGAACCTGAAGAAGTTAAGCAGAGTTTTCCAGTAAGCGAACTGGCCGAAGTGTCTGTTCGAAATTTTGACTTAAATTTGGACCCAGATGAGAATATGGATTCTTTAGACACACCAACTTCTGTCCCAACTAGTTCATCTGCAAAATCAGTGTCAGAAGAGAAGCATGAGGAATACCCTGGATGGTCCTTGTCTGAGATGGAAAAAATGATCATTGATCCCATTCAACTAGCTAACTTAAATGGAAGGATTGATGAAGATGAAGAGGATTATGATGAAGAAATGTAG 915 0.4066 MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYDITLRRGAKTMNAFHLKQCVQTFNVFDFLKDIVSKVPDLGGSVATGDDHAVTKRRFVLWLILLLLGTSFLYAKFCLFYIRKVAGDDDNDSDEELKRNKKPEPGHSSGRGRGRGRGRGLGGGIRTVDQEMSSHAKCEDDSDVLKQNDNHTQSNESMENVLEPEEVKQSFPVSELAEVSVRNFDLNLDPDENMDSLDTPTSVPTSSSAKSVSEEKHEEYPGWSLSEMEKMIIDPIQLANLNGRIDEDEEDYDEEM 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02595 304 PANTHER HISTONE SUPERFAMILY PROTEIN 1 108 - -
Gma02g02595 304 PANTHER HISTONE SUPERFAMILY PROTEIN 131 303 - -
Gma02g02595 304 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 131 303 - -
Gma02g02595 304 MobiDBLite consensus disorder prediction 138 159 - -
Gma02g02595 304 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Gma02g02595 304 MobiDBLite consensus disorder prediction 180 195 - -
Gma02g02595 304 Coils Coil 286 304 - -
Gma02g02595 304 MobiDBLite consensus disorder prediction 242 258 - -
Gma02g02595 304 MobiDBLite consensus disorder prediction 138 222 - -
Gma02g02595 304 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 108 - -
Gma02g02595 304 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Gma02g02595 304 MobiDBLite consensus disorder prediction 234 272 - -
Gma02g02595 304 SUPERFAMILY Histone-fold 4 88 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02595 Gma-Chr2 51937767 51941349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02595 1 293 CCAAT-HAP5 Transcription Factor Family AT3G12480 40.317 1.51e-56 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Gma02g02595 CBFD_NFYB_HMF 5.1e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02595 K21752 - gmx:100814800 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02595 02 51937767 51941349 Gma02g02595 02 51937767 51941349 ECH
Gma14g00332 14 2995507 2998961 Gma02g02595 02 51937767 51941349 GST