Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02585 ATGGCAATTGCAGCCCCAGGGCAACTGAACGTGAATGAATCACCCATTTGGGGATCCAGAAGTGTTGATTGCTTCGAGAAATTGGAGCAAATTGGCGAGGGCACATATGGTCAGGTTTACATGGCTAAAGAGATCAAAACTGGTGAAATTGTTGCTCTGAAGAAAATACGAATGGACAATGAGAGAGAGGGGTTTCCTATAACTGCTATACGAGAAATCAAAATTCTAAAGAAACTACACCATGAAAATGTCATCAAGCTGAAAGAAATTGTGACTTCTCAAGATGGTAACAAATATAAAGGTGGCATCTATATGGTCTTTGAATACATGGACCATGATTTAACTGGTCTTGCTGACCGACCTGGGATGAGATTCACAGTTCCCCAAATTAAGTGTTACATgagacagcttttgacggggcttcactattgtcatgtaaatcaAGTACTTCATCGAGATATCAAAGGCTCAAATCTTCTTATAGACAATGAAGGAAATCTTAAGCTTGCAGATTTTGGACTGGCACGATCATTTTCTAATGACCAAAATGCAAATCTTACAAATCGTGTCATTACGTTATGGTACAGACCACCTGAGTTGCTGCTAGGGACAACAAAGTATGGACCAGCTGTGGATATGTGGTCTGTTGGGTGCATTTTTGCTGAGCTTCTTCAAGGGAAGCCTATCTTTCCTGGAAAAGATGAGCCAGAACAATTAAACAAAATATATGAGCTGTGTGGAGCACCAAATGAAGTCAATTGGCCTGGGGTTTCCAAGATACCTTATTATAATAAATTTATGCCAACAAGGCCGATGAAAAGACGTTTGAGGGATGTCTTCAGGCATTTTGATCATCATGCTCTGGAATTGTTGGAGAAGATGTTGACACTTGATCCTTCTCAGAGAATTACTGCGAAAGATGCACTTGATGCTGAGTATTTCTGGACAGATCCATTACCATGCGATCCCAAGAGTTTACCCAAGTACGAGTCATCACATGAGTTTCAGACAAAGAAAAAGCGCCAACAACAACGGCAAAATGAAGAAATGGCTAAGCGTCAGAAAATGCAGCACCCACAGCCACACACTCGTCTTCCCCCCATTCAGCAGCCTGGGCAACATGCCCAAATGCGGTCAGGACCAAACCAACCAATTCATGGCTCTCAACCCCAAGTTTCTGCAGGACCTACCCATCATTATGGGAAGCCCCGAGGTCCATCTGGTGGGCCAGGAAGATATCCTCCCAATGGGAACCCAGGTGGAGGATACAGTCACCCAAATCGAGCAGGTCAAGGTGGTTCTGGTTATGGCAGTGGACCTTATCCTCCTCAAGGGAGGGGGGCGCCTTATGGGTCCAATAGTATGCCTGGTGGTGGTCCTCGTGGCAGTGGTGCCAGCGGCTATGTTGGAGCTCCAAATTATCCCCAACAAGGTGGTCCATATGGGGGCTCAGCAGCTGGTCGTGGCTCGAACATGATGGGTGGAAACCGCAATCAACAACAGTATGGTTGGCAGCAGTAA 1521 0.4398 MAIAAPGQLNVNESPIWGSRSVDCFEKLEQIGEGTYGQVYMAKEIKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSQDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDQNANLTNRVITLWYRPPELLLGTTKYGPAVDMWSVGCIFAELLQGKPIFPGKDEPEQLNKIYELCGAPNEVNWPGVSKIPYYNKFMPTRPMKRRLRDVFRHFDHHALELLEKMLTLDPSQRITAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQNEEMAKRQKMQHPQPHTRLPPIQQPGQHAQMRSGPNQPIHGSQPQVSAGPTHHYGKPRGPSGGPGRYPPNGNPGGGYSHPNRAGQGGSGYGSGPYPPQGRGAPYGSNSMPGGGPRGSGASGYVGAPNYPQQGGPYGGSAAGRGSNMMGGNRNQQQYGWQQ 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02585 506 MobiDBLite consensus disorder prediction 325 506 - -
Gma02g02585 506 MobiDBLite consensus disorder prediction 327 356 - -
Gma02g02585 506 SMART serkin_6 25 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02585 506 SUPERFAMILY Protein kinase-like (PK-like) 18 322 IPR011009 -
Gma02g02585 506 CDD STKc_CDK9_like 25 314 - -
Gma02g02585 506 MobiDBLite consensus disorder prediction 367 395 - -
Gma02g02585 506 Gene3D Transferase(Phosphotransferase) domain 1 112 354 - -
Gma02g02585 506 Pfam Protein kinase domain 25 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02585 506 Gene3D Phosphorylase Kinase; domain 1 12 111 - -
Gma02g02585 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Gma02g02585 506 PANTHER CYCLIN-DEPENDENT KINASE C-2 5 444 - -
Gma02g02585 506 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Gma02g02585 506 MobiDBLite consensus disorder prediction 491 506 - -
Gma02g02585 506 PANTHER CELL DIVISION PROTEIN KINASE 5 444 - -
Gma02g02585 506 ProSiteProfiles Protein kinase domain profile. 25 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02585 Gma-Chr2 51861682 51867338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02585 1 506 Core Cell Cycle Gene Families AT5G10270 74.952 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Gma02g02585 Pkinase 3.2e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02585 K08819 - gmx:100795971 961.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00341 14 3058589 3064713 Gma02g02585 02 51861682 51867338 GST
Gma20g00477 20 9332238 9345367 Gma02g02585 02 51861682 51867338 PCT
Gma02g02585 02 51861682 51867338 Gma20g00477 20 9332238 9345367 PCT