Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02573 ATGGCTTCTTCGGGGCCAAATGGAACTGACAACGGGGATTCGTTGCCTCCCCCGCCTCCTGTTGTCCCATCAGATGTTGTACCTGTCAAAGCTGAGCTGGAGAAGAAGAAGGCTTTGCGGCTTCCAATAGCCAGGCGTGGCCTTGCTTCAAAAGGGACAAAGCTGCAACTTCTCACCAATCACTACAGGGTGAACGTTGCAAATACTGACGGGCATTTTTATCAGTATAGTGTTGCTCTTTTTTATGATGATGGACGACCTGTGGAGGGTAAGGGTGTAGGGAGGAAGCTTCTGGACAGGGTGCATGAGACGTATGATTCTGAATTGAATGGGAAGGATTTTGCATATGATGGTGAGAAGACTCTGTTTACTCTTGGGTCTCTTGCTCGCAACAAGCTTGAGTTTACGGTCGTTTTGGAGGATATTATTGCTTCCAGAAACAATGGAAACTGCAGCCCAGATGGCAATGGAGAACTGAATGAGAGTGACAAAAAGAGGATGAGGCGCCCTAATAGTTCCAAGGCATTTAAAGTTGAGCTTAGCTATGCTTCAAAGATTCCATTGCAGGCCATTGCCAATGCTCTACGTGGACAGGAATCCGAGAATTATCAAGAAGCTATAAGAGTGCTTGATATCATTTTGAGGCAACATGCTGCTAAGCAAGGCTGTTTGCTTGTGAGGCAATCGTTCTTCCACAATGATCCCAAGAATTTTGCTGATGTAGGAGGAGGTGTACTTGGATGCAGGGGTTTCCATTCTAGCTTTAGAACTACACAAAGTGGACTGTCTTTGAACATAGATGTCTCAACCACGATGATAATTACCCCTGGGCCTGTGGTGGACTTCCTAATATCCAATCAAAATGTGAGAGACCCCTTTTCACTTGACTGGGCCAAGGCCAAGAGGACATTAAAAAATCTGAGGATTAAAGCGAGCCCATCTAATCAAGAATTCAAAATAACTGGGATTAGTGAATTCCCTTGCAAAGATCAAACGTTTACCTTGAAGAGAAAAGGTGGTGATGATGTTGCTGAGGAAGAAGTGACAGTATATGATTATTTTGTTAATATCCGCAAGATAGATCTTCGATATTCTGGGGATCTCCCATGTATTAACGTTGGAAAGCCAAAAAGGCCAACTTATATCCCTCTTGAGCTTTGCTCTTTGGTATCCCTGCAACGTTATACAAAAGCACTATCCACTCTTCAAAGGGCTTCATTGGTGGAGAAGTCCAGGCAGAAGCCACAGGAGAGGATGAGGGTTTTGACTGATGCACTTAAAAGTAGCAATTATGGTTCCGAACCAATGCTACGTAATTGTGGGATCTCTATAAGCCCCAACTTTACTGAAGTTGAGGGTCGGGTTTTACAAGCTCCGCGGTTAAAATTTGGTAATGGGGAAGACTTCAATCCTAGAAATGGGAGGTGGAACTTCAATAACAAGAAAATTGTCAAGCCAACTAAAATAGAAAGATGGGCTGTGGTTAACTTCTCTGCACGCTGTGATACACGAGGGCTTGTGAGGGATCTCATTAAGTGTGGTGGAATGAAAGGAATTGTGATAGATCAGCCATTTGATGTGTTTGAAGAAAATGGTCAGTTTAGGCGTGCACCGCCTGTGGTTCGAGTAGAGAAGATGTTTGAATTGGTTCAGTCTAAACTTCCTGGGGCTCCTCAGTTTCTTCTTTGTCTGCTTCCTGAGAGGAAAAATTCTGATCTTTATGGTCCATGGAAGAAGAAGAATCTTGCTGAGTTTGGAATCGTGACTCAGTGTATAGCTCCGACCAGGGTCAATGACCAATATTTGACTAATGTTCTGTTGAAAATCAATGCTAAGCTTGGTGGCCTGAACTCAATACTAGGTGTTGAGCATTCTCCTTCTATTCCTATTGTTTCTAGAGCACCAACCATTATTATTGGCATGGATGTGTCTCATGGTTCGCCAGGGCAAACAGATATTCCTTCAATTGCCGCGGTGGTCAGCTCCCGAGAATGGCCACTAATATCAAAGTATAGGGCTAGCGTCCGTACCCAGTCTCCAAAGATGGAAATGATTGATAATTTGTTCAAGAAGGTTTCTGACAAGGAGGATGAAGGCATAATGAGGGAGCTTCTACTTGATTTCTATACAAGTTCTGGGAATAGAAAGCCCGATAATATAATCATATTCAGGGACGGTGTTAGTGAGTCCCAGTTCAATCAAGTTTTGAACATTGAACTTGATCAAATTATCGAGGCTTGCAAGTTTTTAGATGAAAAGTGGAACCCCAAGTTTTTGGTGATTGTTGCTCAAAAGAACCATCATACTAAATTCTTTCAACCTGGAGCTCCTGACAATGTTCCTCCTGGAACTGTAATTGATAACAAAATTTGCCATCCTCGGAATTATGATTTCTATATGTGTGCACATGCTGGAATGATTGGTACTAGCAGGCCCACACACTACCATGTTCTGTTAGACGAGATTGGCTTTTCACCTGATGATCTACAAGAGCTTGTACATTCATTATCATATGTGTATCAGAGGAGCACCACTGCCATTTCTGTCGTTGCTCCAATTTGCTATGCTCATCTGGCTGCTACTCAGATGGGTCAGTTTATGAAATTTGAAGACAAATCTGAGACATCTTCGAGTCATGGTGGTTCTGGTATGCCTGCTCCTCCCGTCCCTCAGTTGCCAAGATTGCAGGAAAATGTTTCGAGCTCAATGTTCTTTTGTTGA 2721 0.4318 MASSGPNGTDNGDSLPPPPPVVPSDVVPVKAELEKKKALRLPIARRGLASKGTKLQLLTNHYRVNVANTDGHFYQYSVALFYDDGRPVEGKGVGRKLLDRVHETYDSELNGKDFAYDGEKTLFTLGSLARNKLEFTVVLEDIIASRNNGNCSPDGNGELNESDKKRMRRPNSSKAFKVELSYASKIPLQAIANALRGQESENYQEAIRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFADVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIITPGPVVDFLISNQNVRDPFSLDWAKAKRTLKNLRIKASPSNQEFKITGISEFPCKDQTFTLKRKGGDDVAEEEVTVYDYFVNIRKIDLRYSGDLPCINVGKPKRPTYIPLELCSLVSLQRYTKALSTLQRASLVEKSRQKPQERMRVLTDALKSSNYGSEPMLRNCGISISPNFTEVEGRVLQAPRLKFGNGEDFNPRNGRWNFNNKKIVKPTKIERWAVVNFSARCDTRGLVRDLIKCGGMKGIVIDQPFDVFEENGQFRRAPPVVRVEKMFELVQSKLPGAPQFLLCLLPERKNSDLYGPWKKKNLAEFGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNSILGVEHSPSIPIVSRAPTIIIGMDVSHGSPGQTDIPSIAAVVSSREWPLISKYRASVRTQSPKMEMIDNLFKKVSDKEDEGIMRELLLDFYTSSGNRKPDNIIIFRDGVSESQFNQVLNIELDQIIEACKFLDEKWNPKFLVIVAQKNHHTKFFQPGAPDNVPPGTVIDNKICHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFEDKSETSSSHGGSGMPAPPVPQLPRLQENVSSSMFFC 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02573 906 Pfam Argonaute linker 1 domain 226 274 IPR014811 -
Gma02g02573 906 MobiDBLite consensus disorder prediction 150 172 - -
Gma02g02573 906 ProSiteProfiles PAZ domain profile. 301 391 IPR003100 GO:0005515
Gma02g02573 906 CDD PAZ_argonaute_like 276 390 - -
Gma02g02573 906 ProSiteProfiles Piwi domain profile. 560 868 IPR003165 GO:0003676
Gma02g02573 906 SMART DUF1785_2 224 276 IPR014811 -
Gma02g02573 906 Gene3D paz domain 270 395 - -
Gma02g02573 906 SUPERFAMILY Ribonuclease H-like 544 866 IPR012337 -
Gma02g02573 906 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 11 905 - -
Gma02g02573 906 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 11 905 - -
Gma02g02573 906 Pfam PAZ domain 280 407 IPR003100 GO:0005515
Gma02g02573 906 MobiDBLite consensus disorder prediction 1 23 - -
Gma02g02573 906 MobiDBLite consensus disorder prediction 870 893 - -
Gma02g02573 906 SUPERFAMILY PAZ domain 271 431 IPR036085 GO:0005515
Gma02g02573 906 Gene3D - 627 906 IPR036397 GO:0003676
Gma02g02573 906 MobiDBLite consensus disorder prediction 158 172 - -
Gma02g02573 906 Pfam Argonaute linker 2 domain 417 463 IPR032472 -
Gma02g02573 906 Gene3D - 455 621 - -
Gma02g02573 906 Pfam N-terminal domain of argonaute 54 214 IPR032474 -
Gma02g02573 906 Pfam Piwi domain 561 868 IPR003165 GO:0003676
Gma02g02573 906 SMART Piwi_a_2 560 868 IPR003165 GO:0003676
Gma02g02573 906 CDD Piwi_ago-like 435 862 IPR045246 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02573 Gma-Chr2 51747720 51755862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02573 37 906 Eukaryotic Initiation Factors Gene Family AT1G48410 34.778 4.21e-159 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02573 K11593 - gmx:100792105 1798.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g00521 20 12233356 12242095 Gma02g02573 02 51747720 51755862 PCT