Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02568 ATGCAGGCTATCTGGTTCATGCTATCGTTATTGGTGGCTATTGCATTGGGGAATTCAGATATTGATGCTCTCCTTGAATTCAAGAAGAGTATTCAGAATGACCCTTCTGGATTAGTAGTTAATTCTTGGGATTCCAGGTCTTTAGATTCCGATGGTTGTCCTAAGAACTGGTATGGGATAGTGTGTAGTGAAGGCAGTGTTTTATCAATCACTCTGGACAATGCTGGTTTGGTTGGTGAACTTAATTTTCTTGCGATTAATGGCCTTACAATGCTTCGCAATTTGTCAGCTGTCAACAACCAGTTCACAGGAGATCTCTTACACATTGCCACAATAGAGTCACTTGAATATCTTGATTTATCCCTCAACAAGTTTAATGGGCCGTTACTCTCTAACTTCGTTCAGTTGCGCAAGTTAGTATATCTGAATCTTTCTTCAAATGAACTTGGAGGTACTCTTCCTGTTGACTTTCACAAACTTGAGCAGTTGAAGTATTTAGATTTGCACATGAATAACTTCTTTGGGGATATTATGCATATATTTTATCCGATGGGCAGTGTGCTATATGTTGACTTAAGCAGCAATAGGTTTTCTGGTACACCGGATTTGGGACTTGCAGATGAGTCATTTCTCTCTTCAATTCAGTATTTAAATATTAGCCATAATTCCTTGAGTGGTGAGTTATTTGTTCATGATGGTATGCCATACCTTGACAATTTAGAGGTCTTTGATGCTAGTAATAATCAGTTAGAGGGCAATATACCTTCCTTCACGTTTGTGGTATCTCTTCGGATTCTTCGACTTGCATGCAACCAGTTGACTGGTTTACTGCCCGAAGCTCTATTGAAGGAAAGTTCAATGATGTTGTCTGAACTGGATCTTAGTCAAAACAAGCTTGAAGGTCCCATTGGAATTATTACCTCGGTGACTCTGAGGAAGCTTAATTTATCTTCAAACAAATTGTATGGCCCCTTACCTCTCAGGGTAGGCCACTGTTCCATCATAGATTTGAGTAACAACACACTATCAGGTAATTTCTCAAGGATCCGGTATTGGGGTAACTATGTGGAAGTTGTTCAGCTAAGTAGCAACTCATTGGGAGGAATGCTACCAAATGAAACTTCTCAATTTTTAAGGTTAACTTCACTTAAGGTATCCAATAACTCATTGGAGGGCTTTCTCCCACCAATTTTGGGAACATATCCAGAACTAGAAGAGATTGATCTTAGCCTCAACCAGCTCTCTGGGTTCCTCCTGCCAAGCTTTTTCACCTCAACCAAATTGATTAATCTTGATCTCTCCAACAATAAATTTTCTGGATCAATTCTTATTCAATTTCAACCTCCAAATAATCCAATAGTTTCTGCTGAAAATTGTAGTCTGGTGTTTCTTGATCTTTCACACAACAACTTGAGTGGGACTCTTCCTTCAAATATGAGTAGGCTTCACAATTTGGCATATCTCAATCTATGCAACAACCAATTGGTAGGTACTATTCCTGATGACCTTCCAGATGAGTTGAGAGTATTGAATGTATCCTTTAATAATCTTTCTGGTGTTGTACCAGAAAGCTTAAAGCAGTTTCCCGACTCTGCATTTCATCCAGGAAATACTATGCTGGTATTTCCACATTTGCAACCATCACCAAAAGATACTTCCAACCTAGGTTTGAGGGAACATCGGTTACAAAAAAAGTCTGCAACTAGGATTGCCCTGATTGCATGTTTGGTTGCTGGTGGTTTTGTGATGGCTTTTGTGGGTATAATAATTTATTATAAGGTTCATCATGAAAAAGAAAGGACTTCTAAACAAAATGAAGCAAGGGGCATCACCCAAGAGAGTACTTTCACATCAAATATAGAGGAACCTTATAGAAATTTGGAAGTATTACCACCTGCTCAAAGTGGGTCTTCTGATGATGCAAGAAACATTCATCCAGTGGGAAAGAAGCCAATAGATTTTGGCCCTTCTGAATTAGGTAAGAACGAGGAAGGAACATCTACCCCAATGTCTATTTTGTCTCCTTCAAATCCTTCATCTTCAAAAAGCTATCAGTTTGAGAATCCTGGTTCCCTCAAAGTCTCCTCTCCAGATAAACTGGTTGGAGACTTGCATATATTTGATGGATCCTTGGCGCTAACTGCGGAAGAACTTTCATGTGCTCCAGCAGAAGTTATTGGCAGGAGCTGTCATGGAACACTCTACAAAGCTACACTTGATTCTGGTCATGAATTGGCTGTCAAATGGTTAAGAGAAGGAATAACTAAAGGAAAAAAGGAGTTGGCTAGGGAAATAAAGAAACTTGGGACTATCAAGCATCCAAACCTGGTTTCTGTTCAGGGTTACTACTTGGGGCCAAAGGAACATGAGAAACTGATTATATCAAATTACATGAATGCACAATCTTTGGATATTTATCTCCATGAGACAGATAAAGGAAATCTCCATCCTTTGTCTCTTGATGAAAGGCTCAGGGTGGCTGTAGAGGTGGCACAATGTCTGCATTTCTTACACGATGAGAAAGCCATACCTCATGGCAATCTCAAATCCACAAACATTTTGCTAGAAACTCCCAACAGAAATGTTCTCCTCACTGACTACACCCTGCACAGGATACTCACTGCAGCTGGTACTGCTGAGCAAGTTCTGAATGCCGGTGCACTCGGCTATCGGCCTCCCGAGTTTGCTAGATCAAGCAAACCATGCCCTTCCTTGACAAGTGATGTCTATGCATTTGGAGTGATCTTGTTAGAGCTCCTAACAGGAAGAAATTCTGGAGAAATAGTTTCTGGGATTCCAGGGGTGGTTGACCTCATTGACTGGGTGAGGTTCTTAGCCGAACAAAACCGTTCTAGCCAGTGCTTTGATAGGTCTCTAGTGGACAAGAACAATGGGGAAAGACCATCTAAAATTCTTGATGACATGCTAAAGGTGGCTCTTAGATGCATCCTTCCAGCATCTGATAGGCCTGACCTGAAAACTGTCTTTGGTGATCTCTCAACAATAAGCTCTCCACAGGCATTATAA 3027 0.405 MQAIWFMLSLLVAIALGNSDIDALLEFKKSIQNDPSGLVVNSWDSRSLDSDGCPKNWYGIVCSEGSVLSITLDNAGLVGELNFLAINGLTMLRNLSAVNNQFTGDLLHIATIESLEYLDLSLNKFNGPLLSNFVQLRKLVYLNLSSNELGGTLPVDFHKLEQLKYLDLHMNNFFGDIMHIFYPMGSVLYVDLSSNRFSGTPDLGLADESFLSSIQYLNISHNSLSGELFVHDGMPYLDNLEVFDASNNQLEGNIPSFTFVVSLRILRLACNQLTGLLPEALLKESSMMLSELDLSQNKLEGPIGIITSVTLRKLNLSSNKLYGPLPLRVGHCSIIDLSNNTLSGNFSRIRYWGNYVEVVQLSSNSLGGMLPNETSQFLRLTSLKVSNNSLEGFLPPILGTYPELEEIDLSLNQLSGFLLPSFFTSTKLINLDLSNNKFSGSILIQFQPPNNPIVSAENCSLVFLDLSHNNLSGTLPSNMSRLHNLAYLNLCNNQLVGTIPDDLPDELRVLNVSFNNLSGVVPESLKQFPDSAFHPGNTMLVFPHLQPSPKDTSNLGLREHRLQKKSATRIALIACLVAGGFVMAFVGIIIYYKVHHEKERTSKQNEARGITQESTFTSNIEEPYRNLEVLPPAQSGSSDDARNIHPVGKKPIDFGPSELGKNEEGTSTPMSILSPSNPSSSKSYQFENPGSLKVSSPDKLVGDLHIFDGSLALTAEELSCAPAEVIGRSCHGTLYKATLDSGHELAVKWLREGITKGKKELAREIKKLGTIKHPNLVSVQGYYLGPKEHEKLIISNYMNAQSLDIYLHETDKGNLHPLSLDERLRVAVEVAQCLHFLHDEKAIPHGNLKSTNILLETPNRNVLLTDYTLHRILTAAGTAEQVLNAGALGYRPPEFARSSKPCPSLTSDVYAFGVILLELLTGRNSGEIVSGIPGVVDLIDWVRFLAEQNRSSQCFDRSLVDKNNGERPSKILDDMLKVALRCILPASDRPDLKTVFGDLSTISSPQAL 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02568 1008 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 1 1003 - -
Gma02g02568 1008 ProSiteProfiles Protein kinase domain profile. 720 1002 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02568 1008 Gene3D Phosphorylase Kinase; domain 1 726 798 - -
Gma02g02568 1008 Pfam Leucine Rich repeat 458 473 IPR001611 GO:0005515
Gma02g02568 1008 Gene3D Ribonuclease Inhibitor 455 547 IPR032675 -
Gma02g02568 1008 MobiDBLite consensus disorder prediction 600 689 - -
Gma02g02568 1008 SMART LRR_typ_2 260 283 IPR003591 -
Gma02g02568 1008 SMART LRR_typ_2 482 506 IPR003591 -
Gma02g02568 1008 SMART LRR_typ_2 136 159 IPR003591 -
Gma02g02568 1008 SUPERFAMILY Protein kinase-like (PK-like) 724 998 IPR011009 -
Gma02g02568 1008 Gene3D Ribonuclease Inhibitor 19 182 IPR032675 -
Gma02g02568 1008 Coils Coil 1007 1008 - -
Gma02g02568 1008 Pfam Protein tyrosine and serine/threonine kinase 724 995 IPR001245 GO:0004672|GO:0006468
Gma02g02568 1008 SUPERFAMILY L domain-like 355 528 - -
Gma02g02568 1008 SUPERFAMILY L domain-like 36 343 - -
Gma02g02568 1008 Pfam Leucine rich repeat N-terminal domain 18 63 IPR013210 -
Gma02g02568 1008 Pfam Leucine rich repeat 114 173 IPR001611 GO:0005515
Gma02g02568 1008 MobiDBLite consensus disorder prediction 607 622 - -
Gma02g02568 1008 Gene3D Ribonuclease Inhibitor 184 354 IPR032675 -
Gma02g02568 1008 MobiDBLite consensus disorder prediction 661 689 - -
Gma02g02568 1008 PANTHER OS07G0626500 PROTEIN 1 1003 - -
Gma02g02568 1008 Gene3D Transferase(Phosphotransferase) domain 1 799 1007 - -
Gma02g02568 1008 Gene3D Ribonuclease Inhibitor 355 454 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02568 Gma-Chr2 51706415 51710800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02568 237 345 Receptor kinase-like Gene Family AT3G08680 34.821 7.54e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma02g02568 PK_Tyr_Ser-Thr 5.6e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02568 - - gmx:100809980 1972.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02568 02 51706415 51710800 Gma02g02568 02 51706415 51710800 ECH
Gma14g00354 14 3220785 3225353 Gma02g02568 02 51706415 51710800 GST