Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02564 atggaacacaaagtagccacaacaactgaaggacaatccataagatgtaaagcggcaatttgtcgcaaagcaggtgaaccactgagtattgaggagatcattgtggcgccaccaatgcctggtgaagctcgcattcgtattatatgctcctctctctgtcaaaccgatatcagttttcggaacatgcaggaccatcctgccatttatccaagaattctgggtcacgaggcaataggggttgtggaaagtgtaggagaggatgtaactgaagttacaaaaggagatgtgGTTGTTCCAATTTTCTTACCTGATTGTGGGGAGTGTATCGATTGCAAATCAAGCAAGAGCAACCTTTGTTCAAAGTTTCCATTTGAGGTGTCTCCCTGGATGCCTAGATATGCCACTTCTAGATTCACAGATTTAAAAGGAGAGATCATACATCATTTCTTGTCTGTTTCTAGTTTTAGCGAGTACACTGTGGTCGACATTGCCCATCTAATCAAGATTGATCCGGCAATACCACCCAACAGGGCATGCCTCATCAGCTGTGGTATATCAGCAGGGATAGGTGCTGCTTGGAGAGCAGCAGGTGTGGAGCCAGGGTCTACAGTAGCTATTTTTGGGCTGGGGAGTATTGGATTAGCAGTTGCTGAGGGAGCTAGACTTTGTGGAGCAACTAAGATTATAGGTGTGGATGTCAACCCAGAAAGATATGAAATCGgaaaaaggtttggactcacggactttgtccaTTCTGGAGAATGTGAAAATAAATCTGTGAGCCAGcaggttatcatagagatgactggtgggggagcagattattgctttgaatgtgttggtatggcatcattgatgcacgaggcatatgcttcttgtagaaagggttgggggaaaacaatagttttgggagtggacaagccaggatccaagttgaaccttagctgtagtgaggtcctagttagtgggaagagcctcaggggatgtttatttggaggactcaaacctaagtctcatgtacccattctccttaaacgctacatggacaaggaactgaatttggacgagtttgtcacacatgagatggagttcaaggatatcaataaagcttttgatctattgattgaaggacagtgtcttcgatcaacaactgaaggacaacccataagatgtaaagcggcggtttgtcgcaaagctggtgagccactgggtattgaggagatcatggtggcgccaccaatgcctggtgaagctcgcattcgtattatatgctcctctctctgtcgaactgatatcagtttccggaacatgcaggggcctccggccaatttcccaacaattctgggtcatgaggcaataggggttgtggagagcgtaggagaggatgtaactgaagttgcaaaaggagatatgGTTGTCCCAATTTTCATAGCTGAATGTGGGGAGTGTATAGATTGCAAATCAAGCAAGAGCAACCTTTGTTCAAAGTTTCCTTTCAAGCTGTCTCCTTGGATGCCTAGACATGCCACTTCTAGATTCGTGGATTTAAAAGGAGAGATCATACACCACTTCTTGTCTGTTTCTAGTTTTAGCGAGTACACCGTGGTCGACATCGCCCATCTAACCAAGATTGATCCGGAAGTTCCTCCCAGCAAGGCATGCCTCCTCAGTTGTGGTGTATCAACCGGGGTAGGTGCTGCTTGGAGAACAGCAGGTGTGGAGCCAGGGTCTACAGTAGCTATTTTCGGGCTGGGAAGTATTGGATTAGCTGTTGCTGAGGGAGCTAGACTTTGTGGAGCAACAAGGATTATAGGTGTGGATATCAACTCAGAAAAATATGAAATCGGAAAGAAGTTTGGAATCACGGATTTTGTTCATTCTGGAGAATGTGAAAACAAATCTGCGAGCCAGcaggttatcatagagatgactgatggaggagcagattattgttttgaatgtgttggtaatgcatcattgatgcatgaggcatatgcttcttgtagaaagggttggggaaaaacaatagttttgggatcggacaagccaggctccaagttgagccttagctgtagtgagatcctcgttagtgggaagagcctcgtgggatgcatgtttggaggactcaaacccaagtctcatgtgcctattctcattaaacgctacttggacaaggaactgaatttggatgggtttgtcacacatgaagtggagttcaaagatatcaacaaagcttttgatttaatgattaaaggacagtgtcttcgatgtgtgatttggatggacaaatga 2292 0.1885 MEHKVATTTEGQSIRCKAAICRKAGEPLSIEEIIVAPPMPGEARIRIICSSLCQTDISFRNMQDHPAIYPRILGHEAIGVVESVGEDVTEVTKGDVVVPIFLPDCGECIDCKSSKSNLCSKFPFEVSPWMPRYATSRFTDLKGEIIHHFLSVSSFSEYTVVDIAHLIKIDPAIPPNRACLISCGISAGIGAAWRAAGVEPGSTVAIFGLGSIGLAVAEGARLCGATKIIGVDVNPERYEIGKRFGLTDFVHSGECENKSVSQQVIIEMTGGGADYCFECVGMASLMHEAYASCRKGWGKTIVLGVDKPGSKLNLSCSEVLVSGKSLRGCLFGGLKPKSHVPILLKRYMDKELNLDEFVTHEMEFKDINKAFDLLIEGQCLRSTTEGQPIRCKAAVCRKAGEPLGIEEIMVAPPMPGEARIRIICSSLCRTDISFRNMQGPPANFPTILGHEAIGVVESVGEDVTEVAKGDMVVPIFIAECGECIDCKSSKSNLCSKFPFKLSPWMPRHATSRFVDLKGEIIHHFLSVSSFSEYTVVDIAHLTKIDPEVPPSKACLLSCGVSTGVGAAWRTAGVEPGSTVAIFGLGSIGLAVAEGARLCGATRIIGVDINSEKYEIGKKFGITDFVHSGECENKSASQQVIIEMTDGGADYCFECVGNASLMHEAYASCRKGWGKTIVLGSDKPGSKLSLSCSEILVSGKSLVGCMFGGLKPKSHVPILIKRYLDKELNLDGFVTHEVEFKDINKAFDLMIKGQCLRCVIWMDK 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02564 763 Pfam Alcohol dehydrogenase GroES-like domain 415 543 IPR013154 -
Gma02g02564 763 Pfam Alcohol dehydrogenase GroES-like domain 40 169 IPR013154 -
Gma02g02564 763 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 385 760 - -
Gma02g02564 763 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 9 383 - -
Gma02g02564 763 SUPERFAMILY GroES-like 712 760 IPR011032 -
Gma02g02564 763 Pfam Zinc-binding dehydrogenase 212 333 IPR013149 -
Gma02g02564 763 Pfam Zinc-binding dehydrogenase 587 708 IPR013149 -
Gma02g02564 763 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 173 349 IPR036291 -
Gma02g02564 763 Gene3D - 19 381 - -
Gma02g02564 763 SUPERFAMILY GroES-like 337 383 IPR011032 -
Gma02g02564 763 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 449 463 IPR002328 GO:0008270|GO:0016491
Gma02g02564 763 Gene3D - 188 329 - -
Gma02g02564 763 Gene3D - 563 704 - -
Gma02g02564 763 SUPERFAMILY GroES-like 9 194 IPR011032 -
Gma02g02564 763 Gene3D - 394 756 - -
Gma02g02564 763 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 548 724 IPR036291 -
Gma02g02564 763 PANTHER ALCOHOL DEHYDROGENASE 385 760 - -
Gma02g02564 763 PANTHER ALCOHOL DEHYDROGENASE 9 383 - -
Gma02g02564 763 SUPERFAMILY GroES-like 384 569 IPR011032 -
Gma02g02564 763 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02564 Gma-Chr2 51661556 51670021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02564 417 561 Monolignol Biosynthesis Gene Families AT4G37970 27.891 1.11e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02564 K00121 K18857 gmx:100788053 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00359 14 3250507 3254138 Gma02g02564 02 51661556 51670021 GST