Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02558 ATGGGAGAAGGAAGTGACCATCAAGCTATGGCAGACAATGGAAATGCTGAATCTAGTGAAGGTGGAGTTAGTAGTGCTGAAAACAACTCTGGTTCTCATGTTCGGGTTGGGGTTTCTGAGCCATATGTGGGTAGGGAATTTGATTCTGAAGATGCTGCAAAGGCTTTCTACATTGAGTATGGCAAACGAGTGGGTTTCAGCTGCAAAGCTGGCCTATATGGTGGTTGTTCCACAGCTGATGGGGCAAATATGTACCGGGAGTTTGTGTGTGGCAGGGAAGATTCAAAAAGAAAGCCTCCTGAAAGCTGCAATGCAATGATTAGGATCGAGCAGAAGGGTCAAAATAAGTGGGTTGTTACAAAATTTATAAAGGATCATAGCCATTCCCTTGGTAACCTTAGTAAGGTGCATAATATTCGGCCACGTAAGCCCTTTTCTAGTGTTGGAAGAACCATGCCTGAAACTTACCAAGGAGTGGGGCTTGTTCCAAGTGGTGTGATGTATGTATCTATGGATAAGAATTGCATTCCCACTAAGAATATTCAGGGAATTAAGAATATTCCTGCAGCTGCTGCTGTTGCTGAAACAAATCAGCCAGTTAAAAGTCCTACAATGATGAATTATGCTGTTAGGCCACCTAGTCGAAAGAGGACATTAGGGAAGGATGCTCAGAACCTGctggagtactttaagaaaatgcaagctgagaaccctggtttcttctatgcaatccaacttgatgaagataatcatatgtctaatgtgttttgggcagatgcaagatcaaggacttcttacagtcattttggtgatgcagttactctggacacaacatacagaataaatcaatatggagtgccatttgctccattcactggggtaaaccatcatggtcagatgattttgtttggctgtgcacttcttttggatgattctgaagcttcttttgtgtggctttttaagacatttctgacagcgatgaatgaccgataccctgtctctatcactactgatcaagacagagccatacagacagccgtttcacaagtttttcctcaaacacgccactgtataagcaaatggcatgtcttgcgagaaggccatgaaaagttggcccatgtatgcaacatgcatccaaattttcagattgaactttataattgtattaatctgacggaaacaattgaggagtttgattcatcttggaattttatcatcaataaatatgaactcacaaaaaatgattggcttcagtccttgtacagtgctcgtgctcaatgggttccagcatattttcgtgattcattttttgcagcaatatctcctaatcaaggatttgaTGGTTCTTATTTTTATGGTTTTGTCAACCACCAGACAACATTACCACTGTTCTTTAGGCAGTATGAACAAGCTTTGGAGTGCTGGTTTGAAAAAGAATTAGAATCAGATTATGAGACAATTTGTACCACCCCTGTTCtgaagacaccttccccgatggagaagcaggctgcgaatctctatacgcggaaaatattttcaaagtttcaagaagagctagttgaaacttttgcttatACTGCCAACAGAATTGAAGAAGATGGAGAAAATAGCATATTCAGGGTTGCAAAATTTGAGGATGACCAAAAGGCATATGTTGTCACATTAAACCTTTCTGAGTTGAGAGCTAACTGTAGTTGCCAAATGTTTGAGTATTCAGGCATTCTTTGTAGACATGTTCTAACTGTTTTTACTGTGACTAATGTACTTACATTACCATCTCATTACATTTTAAAACGGTGGACAAGAAATGCAAAAAGCAGTGCTGGATCAGTTGAACTTGCTGGTGAATCACTTGGACACGAGTCTTTGACATCACGATATAGCAATCTTTGTTGGGAAGCCATCAAGTATGCTGAAGAAGGGGCATTGACTGTGGAAATTTATGATACTGCAATTAGTGCTCTTAGAGAAAGTGGAAAGAAGATTTCTTTCATGAGGAGAAGTGTTGCCAAAGTTGCCCCTCCCAGTCATCCAGCCAGTGGGACTGCTTATGATGACAGAAAATCCCCTACTTCAACAGTAGATACAAACCCTCTTTTGTGGCCATTGCAGGATGAAACAACACAGAGGTTTAATCTTAATGATGCTAGTACTCCCGTTCAATCAGTTGCTGATCTAAATTTACCGCAAATGACCCCAGTGTCTCTCCAGCGAGATGATGGTCCACCAGAAAACATGGTGGTTTATCCATGTCTGAAATCATTGACGTGGGTAATGGAGAACAGGAACTCAACACCAGGGAATAGAGTAGCTGTTATCAGTCTTAAGttgcaagattatagcaggattccttcaacagaatccgaggttaagtttaatctctcaaaagttagcttggaaccattgtttaaccatatggtcaacatcagtgatcagctttccacaccaactaggaagtttgctgtattgAATCTCAAGCTTCCCGTCGCCGAGACAACTTCTGGTGCGAGTGAAGTTAAGTTTCAGGTGTCCAAGGACACATTGGGTGCTGTACTACGATCAATGGCCTATATCCGCGAGCAACTCTTGGGTCCTGGTGATGCACAGACAGAACCTCTGTCAAAAAGGCCTCGAAAGTGA 2640 0.2803 MGEGSDHQAMADNGNAESSEGGVSSAENNSGSHVRVGVSEPYVGREFDSEDAAKAFYIEYGKRVGFSCKAGLYGGCSTADGANMYREFVCGREDSKRKPPESCNAMIRIEQKGQNKWVVTKFIKDHSHSLGNLSKVHNIRPRKPFSSVGRTMPETYQGVGLVPSGVMYVSMDKNCIPTKNIQGIKNIPAAAAVAETNQPVKSPTMMNYAVRPPSRKRTLGKDAQNLLEYFKKMQAENPGFFYAIQLDEDNHMSNVFWADARSRTSYSHFGDAVTLDTTYRINQYGVPFAPFTGVNHHGQMILFGCALLLDDSEASFVWLFKTFLTAMNDRYPVSITTDQDRAIQTAVSQVFPQTRHCISKWHVLREGHEKLAHVCNMHPNFQIELYNCINLTETIEEFDSSWNFIINKYELTKNDWLQSLYSARAQWVPAYFRDSFFAAISPNQGFDGSYFYGFVNHQTTLPLFFRQYEQALECWFEKELESDYETICTTPVLKTPSPMEKQAANLYTRKIFSKFQEELVETFAYTANRIEEDGENSIFRVAKFEDDQKAYVVTLNLSELRANCSCQMFEYSGILCRHVLTVFTVTNVLTLPSHYILKRWTRNAKSSAGSVELAGESLGHESLTSRYSNLCWEAIKYAEEGALTVEIYDTAISALRESGKKISFMRRSVAKVAPPSHPASGTAYDDRKSPTSTVDTNPLLWPLQDETTQRFNLNDASTPVQSVADLNLPQMTPVSLQRDDGPPENMVVYPCLKSLTWVMENRNSTPGNRVAVISLKLQDYSRIPSTESEVKFNLSKVSLEPLFNHMVNISDQLSTPTRKFAVLNLKLPVAETTSGASEVKFQVSKDTLGAVLRSMAYIREQLLGPGDAQTEPLSKRPRK 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02558 879 MobiDBLite consensus disorder prediction 11 35 - -
Gma02g02558 879 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 30 804 - -
Gma02g02558 879 MobiDBLite consensus disorder prediction 673 699 - -
Gma02g02558 879 MobiDBLite consensus disorder prediction 1 37 - -
Gma02g02558 879 MobiDBLite consensus disorder prediction 685 699 - -
Gma02g02558 879 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 30 804 IPR031052 GO:0006355
Gma02g02558 879 Pfam FAR1 DNA-binding domain 56 130 IPR004330 -
Gma02g02558 879 ProSiteProfiles Zinc finger SWIM-type profile. 551 587 IPR007527 GO:0008270
Gma02g02558 879 Pfam MULE transposase domain 273 364 IPR018289 -
Gma02g02558 879 Pfam SWIM zinc finger 551 585 IPR007527 GO:0008270
Gma02g02558 879 SMART 26again6 562 589 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02558 Gma-Chr2 51643923 51648136 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gma02g02558 MULE 4.2e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02558 - - gmx:100807296 1757.65