Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02541 ATGTCAGATGACATGCTCATTCATTTCTCATCCAACTCTTCCAACCAATCAGATCAGTCTCTGCCTACAAAGATTGCTAAGTTGGAAGCTCGAATGGTTGGTAAGGGTTCCTCCACCGCTGCTCAGCAATCAGGTTGGTCCTCTGCGTCTGTTCCTTCTGCTGGGAAATTTGGCGGAGCTGCTGAAAATTTGGCTGAACCATCCACTTCCAGTGATTCTGATGATGATAATGGTGGGAAATTCTTAATACAAGCCAACACTCAGAAACGCCAAAAACTTCAAGAAGATGGCAGCGCAAGTGTTTTTGAATGTGTTGAGGTTGTTACCGATGGAAGGCAAACTAGTTTGGAGGCTGTGGAGACGAAAAATAATATTGATGTGAATAGAAAGAAACATGGCCGTGGAAGAGGGAGTTCTGGTTCAGGTAGAGGCCGTGGTTCCAGAGTTACTGATCAGACCAAAACACCAATTTCTCCACCAACTGTTTTGGCTTCAAATGGTCACATTGAGAATGTATACCATAAAGATGGTAGACTCAGTGATCAGTTTCATAGTGATAATTCTGCTTCATTAGAGGAGGACGTTGCATCTTTACAAGCAAAAGTTGTTGCATTGGAGGAGGAATTGCGCAAATCAAAGCAAGAGACCGCTGATTATCAAAATCTTTATCGACAGTTAGAAAAGGAACTGAAGGAGCTGAATGATCATGAACAGAAAATGAAGCCTAAGAGAATGAAAATAATATCTGACTTGCTGATATCCGTTTCAAAGGCTGAGAGACAAGAAGCAAGGTTGAAAGTACGGCAAGACTCATTGAGACTTGGAAATGTTGGTGTAATCAGAGCTGGAACTGTCATATCCGAGACCTGGGAAGATGGTCAAGCTTTAAAGGATCTGAATGCCCAGCTTAAACAACTAATAGAAACAAAGGAGGCAATCGAGCGGCAGCGCAAGTTATTGAAGAAAAAACAATCTGATAAGGGTGATGGAACAGCAGATGCAGAGGCTGGATTACCAGAAGATATTCTAATTCATGATGAGATCTACAAATCTCGATTAGCTAGCCTTAAAAGAGAAGAAGAAAATATTTTGCGGGAGAGAGAACGATATGAAATAGAGAAGGGGAGGTTAATTCGTGAAATGAAACGTATACGAGATGAAGATGGTTCGCGGTTTAACAACTTTCAGATTCTAAATCATCGCTATGCCCTTCTTAACCTTCTTGGAAAAGGAGGATTCAGTGAGGTGTACAAGGCTTTTGACTTGGTTGAGCATAGATATGTTGCATGCAAGCTTCATGGTTTAAATGCTCAATGGAGTGAAGAGAAGAAGCAAAGCTACATACGCCATGCAATTCGGGAGTATAATATTCACAAGACTCTTGTACATCGTCACATTGTTCGTTTATGGGACATTTTTGAGATTGATCAAAACACATTTTGCACCGTTCTAGAGTATTGTAGTGGGAAAGATCTTGATGCTGTCCTCAAGGCAACACCTATATTACCCGAGAGGGAGGCTAAGGtcatcatagttcaaatttttcaaggccttatttacatgaataaaagagcacagaagattatccattatgatttgAAGCCTGGAAATGTTCTGTTTGATGAGCTTGGTGTTGCCAAAGTGACTGATTTTGGTCTTAGTAAGATAGTGGAGGATGATGTGGGATCCCAGGGCATGGAACTTACATCCCAGGGAGCTGGAACATACTGGTATTTACCTCCTGAATGCTTTGAGCTCAGCAAGACACCTCTTATATCATCAAAGGTTGATGTCTGGTCTGCTGGAATTTTGTATTATCAAATCCTCTTTGGCCGACGTCCTTTTGGGCATGACCAAACACAAGAGAGAATACTTCGTGAAGACACAATTATTAAGGCACGCAAGGTTGAATTTCCTTCTAGACCTACCATTTCTAATGAGGCAAAGGATTTTATTCGACGGTGTCTAACATATAACCAGGCTGAGAGACCAGATGTATTAACCATTGCTCAAGACCCATATCTCACTTTCTCAAAAAAGTTGTAA 2046 0.4008 MSDDMLIHFSSNSSNQSDQSLPTKIAKLEARMVGKGSSTAAQQSGWSSASVPSAGKFGGAAENLAEPSTSSDSDDDNGGKFLIQANTQKRQKLQEDGSASVFECVEVVTDGRQTSLEAVETKNNIDVNRKKHGRGRGSSGSGRGRGSRVTDQTKTPISPPTVLASNGHIENVYHKDGRLSDQFHSDNSASLEEDVASLQAKVVALEEELRKSKQETADYQNLYRQLEKELKELNDHEQKMKPKRMKIISDLLISVSKAERQEARLKVRQDSLRLGNVGVIRAGTVISETWEDGQALKDLNAQLKQLIETKEAIERQRKLLKKKQSDKGDGTADAEAGLPEDILIHDEIYKSRLASLKREEENILRERERYEIEKGRLIREMKRIRDEDGSRFNNFQILNHRYALLNLLGKGGFSEVYKAFDLVEHRYVACKLHGLNAQWSEEKKQSYIRHAIREYNIHKTLVHRHIVRLWDIFEIDQNTFCTVLEYCSGKDLDAVLKATPILPEREAKVIIVQIFQGLIYMNKRAQKIIHYDLKPGNVLFDELGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILYYQILFGRRPFGHDQTQERILREDTIIKARKVEFPSRPTISNEAKDFIRRCLTYNQAERPDVLTIAQDPYLTFSKKL 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02541 681 MobiDBLite consensus disorder prediction 1 82 - -
Gma02g02541 681 ProSiteProfiles Protein kinase domain profile. 402 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02541 681 Coils Coil 353 387 - -
Gma02g02541 681 ProSitePatterns Protein kinases ATP-binding region signature. 408 431 IPR017441 GO:0005524
Gma02g02541 681 PANTHER MIXED LINEAGE PROTEIN KINASE 1 680 - -
Gma02g02541 681 Coils Coil 188 239 - -
Gma02g02541 681 MobiDBLite consensus disorder prediction 119 164 - -
Gma02g02541 681 MobiDBLite consensus disorder prediction 143 164 - -
Gma02g02541 681 MobiDBLite consensus disorder prediction 1 23 - -
Gma02g02541 681 MobiDBLite consensus disorder prediction 36 51 - -
Gma02g02541 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 528 540 IPR008271 GO:0004672|GO:0006468
Gma02g02541 681 MobiDBLite consensus disorder prediction 64 82 - -
Gma02g02541 681 Gene3D Transferase(Phosphotransferase) domain 1 393 680 - -
Gma02g02541 681 Pfam Protein kinase domain 403 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02541 681 SMART serkin_6 402 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02541 681 SUPERFAMILY Protein kinase-like (PK-like) 394 676 IPR011009 -
Gma02g02541 681 Coils Coil 296 326 - -
Gma02g02541 681 CDD STKc_TLK 401 674 - -
Gma02g02541 681 PANTHER BNAC09G36930D PROTEIN 1 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02541 Gma-Chr2 51499457 51506901 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02541 385 680 MAP Kinase Kinase Kinase AT3G13530 27.425 1.32e-28 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TLK Gma02g02541 Pkinase 2.9e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02541 K08864 - gmx:100805168 1309.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02541 02 51499457 51506901 Gma02g02541 02 51499457 51506901 ECH