Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02523 ATGATAGGGTTTGGAGGGAACAGTTGCAGTGAGCTTTCTGAGATGGACATGACGAACATGGAAACTAATAGGAAGTTTCTTTCTCTGCCTCTCAGTAACAACAACAACTCTGGTGATAATAGAAGGGTACCTGTCACTAGCAATAGCATCGCTCAGGAACATCACTACAGCCACCACCACAACCCCACCGACACTTGCAGTGTGAGGGATAAAATCATGGCACATCCTCTTTTTCCTCGTCTCTTATCCTCTTACCTCAATTGCCTCAAGGTTGGAGCACCTCCTGAAGTGGTGGCTAGCTTAGAGGAGTCATATGCAAAATATGAGTCCTTCAATGCATCATCAGGAAGGATAGGAGGTGGTTCAATAGGTGAAGATCCAGCTCTGGACCAGTTCATGGAGGCTTACTGTGAGATGCTCATTAAGTATGAGCAAGAGCTTACAAAACCCTTCAAAGAAGCCATGCTTTTCTTCTCAAGAATTGAGTGCCAGCTCAAAGCCCTAGCAGTTTCATCAGATTTTGGTCAAAGTGAAACATCTTCAAAGAATGAGGTTGATGTTCATGAAAACAACCTAGATTCTCAAGCTGAAGACCGGGAACTCAAAGTCCAGCTTTTGCGCAAGTATAGTGGATATCTAGGGAGCCTCAAGAAGGAATTTTTGAAGAAGAAAAAGAATGGAAAGTTGCCAAAGGAAGCTCGGCAACAGCTACTTGATTGGTGGAACAGGCATTATAAATGGCCATACCCTTCGGAATCTCAAAAGCAGGCACTTGCAGAATCCACAGGCCTAGATATGAAACAGATCAACAACTGGTTCATCAATCAGAGAAAACGCCATTGGAAGCCTTCTGAGGATATGCAATTTGCCGTGATGGATGCAACTAACTACTACATGGAAAATGTTATGTGCAAGCCATTTCCCATGGATAGCATGCCTATGCTTCTTTAA 951 0.4364 MIGFGGNSCSELSEMDMTNMETNRKFLSLPLSNNNNSGDNRRVPVTSNSIAQEHHYSHHHNPTDTCSVRDKIMAHPLFPRLLSSYLNCLKVGAPPEVVASLEESYAKYESFNASSGRIGGGSIGEDPALDQFMEAYCEMLIKYEQELTKPFKEAMLFFSRIECQLKALAVSSDFGQSETSSKNEVDVHENNLDSQAEDRELKVQLLRKYSGYLGSLKKEFLKKKKNGKLPKEARQQLLDWWNRHYKWPYPSESQKQALAESTGLDMKQINNWFINQRKRHWKPSEDMQFAVMDATNYYMENVMCKPFPMDSMPMLL 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02523 316 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 1 307 - -
Gma02g02523 316 SMART ELK_2 200 221 IPR005539 GO:0003677
Gma02g02523 316 Pfam KNOX2 domain 122 168 IPR005541 GO:0003677|GO:0005634
Gma02g02523 316 ProSiteProfiles 'Homeobox' domain profile. 220 283 IPR001356 GO:0003677
Gma02g02523 316 SMART KNOX2_2 119 170 IPR005541 GO:0003677|GO:0005634
Gma02g02523 316 Gene3D - 218 291 - -
Gma02g02523 316 SMART HOX_1 222 287 IPR001356 GO:0003677
Gma02g02523 316 CDD homeodomain 232 284 IPR001356 GO:0003677
Gma02g02523 316 PANTHER HOMEOBOX KNOTTED-LIKE PROTEIN 1 307 - -
Gma02g02523 316 ProSitePatterns 'Homeobox' domain signature. 258 281 IPR017970 GO:0000981|GO:0006355
Gma02g02523 316 SUPERFAMILY Homeodomain-like 222 294 IPR009057 -
Gma02g02523 316 Pfam KNOX1 domain 68 106 IPR005540 GO:0003677|GO:0005634
Gma02g02523 316 Pfam Homeobox KN domain 240 279 IPR008422 GO:0003677|GO:0006355
Gma02g02523 316 ProSiteProfiles ELK domain profile. 200 220 IPR005539 GO:0003677
Gma02g02523 316 Pfam ELK domain 200 221 IPR005539 GO:0003677
Gma02g02523 316 SMART KNOX1_2 66 110 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02523 Gma-Chr2 51348398 51352729 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02523 68 312 Homeobox Transcription Factor Family AT1G62360 68.340 5.88e-111 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Gma02g02523 KNOX2 4.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02523 - - gmx:100801995 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00393 14 3649433 3663894 Gma02g02523 02 51348398 51352729 GST