Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02510 ATGCAAGTGGCGGCAGAACTCCAACGCGCCCATCACCACCACCAAAGGCACAAACAAGACACTCCCATGTGCCGCCAAATCCAGCTCACTATCTCCGATCACACCACCGCCGGAGACGACGACGGCGAGGATCTCTTCATTCCGCCCCTCAACTTCGCCATGGTTGATAATGGCATTTTCCGCTCCGGCTTCCCCGAACCCGCCAACTTCTCCTTCCTCCAAACCCTCGGCCTCCGTTCCATCATATATCTGTGTCCTGAGCCGTATCCGGAGCCCAATATGGAGTTCCTCAAGTCAAATGGGATCAAGCTTTTTCAGTTTGGGATTGAGGGTCATAAGGAGCCTTTTGTGAACATCCCAGAGGACACAATCCGTGAAGCACTAAAAGTTGTTCTTGATGTCAGGAACCACCCAGTTATAATTCACTGTAAGCGTGGAAAGCACCGAACGGGTTGCTTAGTAGGATGCTATAGAAAATTGCAAAAATGGTGCTTGTCATCTGTCTTTGATGAATACCAACGCTTTGCAGCTGCCAAAGCAAGAGTTTCAGATCAGAGGTTTGTAGAGTTGTTTGATATTTCCAGCCTGAAACATTTTCCTATACCCTTTTCATGTTTGAAGAGGTGA 627 0.4864 MQVAAELQRAHHHHQRHKQDTPMCRQIQLTISDHTTAGDDDGEDLFIPPLNFAMVDNGIFRSGFPEPANFSFLQTLGLRSIIYLCPEPYPEPNMEFLKSNGIKLFQFGIEGHKEPFVNIPEDTIREALKVVLDVRNHPVIIHCKRGKHRTGCLVGCYRKLQKWCLSSVFDEYQRFAAAKARVSDQRFVELFDISSLKHFPIPFSCLKR 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02510 208 CDD PFA-DSP_Siw14 45 192 - -
Gma02g02510 208 ProSitePatterns Tyrosine specific protein phosphatases active site. 141 151 IPR016130 GO:0016311|GO:0016791
Gma02g02510 208 PRINTS Plant and fungal dual specificity phosphatase signature 119 133 IPR020428 GO:0016791
Gma02g02510 208 PRINTS Plant and fungal dual specificity phosphatase signature 46 63 IPR020428 GO:0016791
Gma02g02510 208 PRINTS Plant and fungal dual specificity phosphatase signature 102 116 IPR020428 GO:0016791
Gma02g02510 208 PRINTS Plant and fungal dual specificity phosphatase signature 83 96 IPR020428 GO:0016791
Gma02g02510 208 Gene3D Protein tyrosine phosphatase superfamily 45 195 IPR029021 -
Gma02g02510 208 PANTHER TYROSINE-PROTEIN PHOSPHATASE 19 205 - -
Gma02g02510 208 PANTHER - 19 205 - -
Gma02g02510 208 MobiDBLite consensus disorder prediction 1 22 - -
Gma02g02510 208 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 193 IPR029021 -
Gma02g02510 208 Pfam Tyrosine phosphatase family 47 198 IPR004861 -
Gma02g02510 208 ProSiteProfiles Dual specificity protein phosphatase domain profile. 51 205 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02510 Gma-Chr2 51194671 51201773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02510 42 208 Protein tyrosine phosphatase (PTP) family AT4G03960 78.443 1.18e-99 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02510 K18045 - gmx:100814279 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00410 14 3926783 3930968 Gma02g02510 02 51194671 51201773 GST