Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02497 ATGAGGAAAAGGGAGAGGGAGAATCCTTGTGGCGTGTGTGGCCACTATCACAAATACGAAGAAGGGGAAGTGTGTTCAATTTGCGGTCACCGGATTCCGGTTGGATCGGAGAAAACTTCGATACAAGTCAGTGCTTTTCCTTCCGTTGTCCTGCCGGAATTTCTTTACCTAGGAAGCTACGACAATGCGTCCCGCTCCGAGCTTCTCAAGACTCAGGGGATTTCTCGTATCCTCAATACTGTTCCTTCTTGTCAAAATCTCTACAAGAACTCGTTTACCTATCACTGCCTTCCAGATGACAAAACTTTGCCATTTGATGAAGCAATTCAGTTTCTAGAGCAATGTGAGAAGGACAAGGAGCGTGTTCTGGTTCATTGCATGTCAGGAAAGAGTAGGTCTCCAGCTATTGTGATTGCATACTTGATGAAGTTCAAAGGGTGGAGACTTGCACAGAGTTATCAGTGGGTAAAAGAACGGAGACCTTCTGTTGAATTAACTCAAGGTGTGTACCAGCAACTGCAGGAGTTTGAGCAAAAGATCTATGGACCGATTGATAGTGGCAGCTCTGTGCCGCCTGGTTTCTTGCCTACAGCACCTTCAATTAGCTTTGGTTTCCCAAAGATCAATGATCCAGCTCAGCTTCCTTCCTTCAGCACTGCTGGAACTCCTTCAATCTTTGCGCGAGCACCCCTAGATATTGCTCCAACCGAGTTTACATTCGGTGCCGGTCAGACTCAGAAGAATGTGGCTGGAAACCCCTATAATGCAAATCCAGCAAATCCAAATGGCACTGATATCCAAATGGATGGTTCTTGA 816 0.462 MRKRERENPCGVCGHYHKYEEGEVCSICGHRIPVGSEKTSIQVSAFPSVVLPEFLYLGSYDNASRSELLKTQGISRILNTVPSCQNLYKNSFTYHCLPDDKTLPFDEAIQFLEQCEKDKERVLVHCMSGKSRSPAIVIAYLMKFKGWRLAQSYQWVKERRPSVELTQGVYQQLQEFEQKIYGPIDSGSSVPPGFLPTAPSISFGFPKINDPAQLPSFSTAGTPSIFARAPLDIAPTEFTFGAGQTQKNVAGNPYNANPANPNGTDIQMDGS 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02497 271 MobiDBLite consensus disorder prediction 245 271 - -
Gma02g02497 271 ProSitePatterns Tyrosine specific protein phosphatases active site. 124 134 IPR016130 GO:0016311|GO:0016791
Gma02g02497 271 Gene3D Protein tyrosine phosphatase superfamily 40 183 IPR029021 -
Gma02g02497 271 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 1 271 IPR044212 GO:0009734|GO:0009738|GO:0033549|GO:0043407
Gma02g02497 271 CDD DSP_plant_IBR5-like 47 176 - -
Gma02g02497 271 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 181 IPR029021 -
Gma02g02497 271 SMART dsp_5 46 179 IPR020422 GO:0006470|GO:0008138
Gma02g02497 271 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 103 171 IPR000387 GO:0016311|GO:0016791
Gma02g02497 271 Pfam Dual specificity phosphatase, catalytic domain 55 178 IPR000340 GO:0008138|GO:0016311
Gma02g02497 271 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 1 271 - -
Gma02g02497 271 ProSiteProfiles Dual specificity protein phosphatase domain profile. 46 182 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02497 Gma-Chr2 51043880 51049102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02497 1 166 Protein tyrosine phosphatase (PTP) family AT2G04550 75.740 2.39e-98 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02497 K04459 - gmx:100808721 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00425 14 4088672 4094663 Gma02g02497 02 51043880 51049102 GST