Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02486 ATGTCGATTCGGGACTCGGAATCACTGAATTGGCACTACGACACAGAACTCGACGATGAAACCCTCGAAATCCGCGGCCGCAAGctcttcttcgtcatcgtcctcttctccatcatcctcctcttcACCGCGCTCTTCGTCTTCGCGCGCCGGATCTGCCGCCACCACCACGGGCTCCTCCTCCCCAACGCCGTCCCGCCGCGCCACGCGTCGCTGTCTCCGCCGCAGAACAGCGGCCTCGACGCCGAGGCGATCAAGAGGCTCCCGATCGTCCTCCACCCGCGGCGCAACCTCGCGGCGGCGGAGGAGACGGAGTGCTGCATCTGCCTCGGCGTGTTCGCCGACGGCGAGAAGCTGAAGGTTCTTCCAGGATGCGACCACAGCTTCCATTGCGAGTGCGTGGACAAGTGGCTCGCGAATCACTCCAATTGCCCTCTCTGCAGAGCTTCGCTCAAGCTCGATTCTTCGTTTCCCCGGATTTTGATCCAATCGCCACCCGTTCGAACTAGTCTTCTGGTCTGA 522 0.5766 MSIRDSESLNWHYDTELDDETLEIRGRKLFFVIVLFSIILLFTALFVFARRICRHHHGLLLPNAVPPRHASLSPPQNSGLDAEAIKRLPIVLHPRRNLAAAEETECCICLGVFADGEKLKVLPGCDHSFHCECVDKWLANHSNCPLCRASLKLDSSFPRILIQSPPVRTSLLV 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02486 173 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 153 IPR013083 -
Gma02g02486 173 SMART ring_2 106 147 IPR001841 -
Gma02g02486 173 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 3 163 IPR044675 -
Gma02g02486 173 ProSiteProfiles Zinc finger RING-type profile. 106 148 IPR001841 -
Gma02g02486 173 PANTHER RING-H2 FINGER PROTEIN ATL66 3 163 - -
Gma02g02486 173 Pfam Ring finger domain 105 148 IPR001841 -
Gma02g02486 173 SUPERFAMILY RING/U-box 96 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02486 Gma-Chr2 50926005 50926921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02486 9 156 C3H Transcription Factor Family AT3G11110 46.622 5.64e-37 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02486 - - gmx:100794554 360.147